Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1455 ATGAGCAGCAGCAACAAAAACAGTGAATTGCAAGCCAATGTAGGCTATTTTGTGAACCCTCTCATCATCTCCGGCGCCGGAATCATCTGCTCCTGCATCGCCTTAGCCACATACCACTTCATCCTCTTTAGGCTCTGCCTTCAAAGCCGACGGCGATTGCAGCATATGGCGGCTCACACAATAAGTCCTCCGATCGACGACATGCACTGCGGCGTCAGCCCTGAAGTCCTCAAGAAAATCCCAATTCTGCCTTACTCTCACAAAAAAGGTGGGGCCTTTCGATTGGACCAAACTGAATGCGCTATTTGCTTAGGCGAATTGCTTGAAGGAGAAAAGGTTCGATTATTGCCTTCTTGTTGCCATGCTTTTCACATAGTTTGTATCGATCTCTGGTTCAATCAAAATTCCAATTGTCCCATTTGTCGAGCCCCTTTAGTAATTCCCGCTCCGCAGCGGTCCCCGGTAGTGGCTTCAGAAACTACTGTTGCTGATGCTGAAGGAATAAGAGTGGTGTCAACAATGCCCCGTGTTCAAAGTGATCGTAACATTGTTGCTTCTTCCAGTTCGACGATTTCGCGATCCCCTCTTGGCGGCAATGCCACGCTTCAGACCACCCTGTTTTCTGTACCGTATCGTCACGAGCAGGATAAGCCTCTGGATTTGATGACGGGGATGAGGAGGTCTCTGTCCATGGATCACTCGCCGCGTGTTTCTGTCTGCATACAGAGAGACGAGGAACATAATAAAGCAGCTGCTTCTTCTTCATCATTGTCTTCTTCGCCGTCTGTGGCTGCAAGGATTGGGATTGCACATGGTAAAGCTATTGATCAGGTTTCGTCCATGTTGATAATGTCTTTCGCGCAGTTTCGTAACAGTATAAATGACAGATCCAAAGGCATTCTACCTAACTGA 912 0.4803 MSSSNKNSELQANVGYFVNPLIISGAGIICSCIALATYHFILFRLCLQSRRRLQHMAAHTISPPIDDMHCGVSPEVLKKIPILPYSHKKGGAFRLDQTECAICLGELLEGEKVRLLPSCCHAFHIVCIDLWFNQNSNCPICRAPLVIPAPQRSPVVASETTVADAEGIRVVSTMPRVQSDRNIVASSSSTISRSPLGGNATLQTTLFSVPYRHEQDKPLDLMTGMRRSLSMDHSPRVSVCIQRDEEHNKAAASSSSLSSSPSVAARIGIAHGKAIDQVSSMLIMSFAQFRNSINDRSKGILPN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1455 303 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Acco02g1455 303 SUPERFAMILY RING/U-box 95 152 - -
Acco02g1455 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 147 IPR013083 -
Acco02g1455 303 PANTHER RING-H2 FINGER PROTEIN ATL16 15 256 IPR044600 GO:0016567|GO:0016740
Acco02g1455 303 Pfam Ring finger domain 99 142 IPR001841 -
Acco02g1455 303 CDD RING-H2_EL5-like 99 142 - -
Acco02g1455 303 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Acco02g1455 303 SMART ring_2 100 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1455 Acco-ChrAcco02 10998264 10999175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1455 21 143 C3H Transcription Factor Family AT1G04360 33.333 5.82e-22 93.2