Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1454 ATGTCGGTGCCTCCGTGGCTTGAGCCCTTACTAACCACTTCCTTCTTCAGCGTCTGCCGCTTCCACGGCGACGCCGCCAGAAGCGAGTGTAATATGTTCTGTCTTGACTGTAATCGCGACGCATTTTGCTTCTATTGCCGTTCTTCCAGACACAATGACCATCAGGTCATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGAGTATCTGAGATTCAGAAGGTGTTGAACATAAGTGGGGTTCAGACGTATGTGATAAACAGCGCCAGAGTGCTGTTCCTGAACGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCACATCTGTGAGATTTGCGGAAGAAGCCTCCTGGACCCTTTCCGCTTCTGTTCTTTGGGTTGTAAGCTTGTGGGAGTGAAGAGAAATGGGGACGCAAGCTTTGCTTTGGAGGGAAACAACAACAACAGCGAGGGAATGCCAAGAAGGAGATCAGTTTCAGTATCTGAAGAAGAATCGCGTGAAGGCTCACAACAAGACATGTATCCGGCCACGCCTCCTCCACCTGCTCTTGCAGCTTCAACCGCAAGAAGAAGAAAAGGCATTCCTCACAGGGCTCCTTTTGCCTCCTAA 615 0.5008 MSVPPWLEPLLTTSFFSVCRFHGDAARSECNMFCLDCNRDAFCFYCRSSRHNDHQVIQIRRSSYHDVVRVSEIQKVLNISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVKRNGDASFALEGNNNNSEGMPRRRSVSVSEEESREGSQQDMYPATPPPPALAASTARRRKGIPHRAPFAS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1454 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 202 - -
Acco02g1454 204 MobiDBLite consensus disorder prediction 142 204 - -
Acco02g1454 204 Pfam PLATZ transcription factor 60 131 IPR006734 -
Acco02g1454 204 SUPERFAMILY B-box zinc-binding domain 17 62 - -
Acco02g1454 204 MobiDBLite consensus disorder prediction 142 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1454 Acco-ChrAcco02 10994863 10996134 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Acco02g1454 PLATZ 3.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1454 02 10994863 10996134 Acco06g0864 06 5716833 5718511 CCT
Acco02g1454 02 10994863 10996134 Acco02g1454 02 10994863 10996134 ECH