LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco02g1433	ATGGCCTCCTGCGACGACGACGGTTTCTCCCTCCTCAGTGACGATCATCACCAATCAAGCTCTGGCCCCAACCACCACCTTCACCAAACTTACCCCCCACATTCCTTCTCGTCCGCCGTCACGCCTGTACCCTCCGAACCGGTGGCCGACACCAGCGAAGTCTATGGATTTGATAACGATGCCGACGAGAGCGACAAGCGAAACGATCGGGAGGAGGCCGGCGAAGGGACGCCGTCGTACGGATACAAAAGGCCCAAGCTTTCCAACGGCGGGGAGTATAGGAAGGATAGGGAGGAGTGGAGCGACGCGGCAATTGTTTGCCTTCTTGAGGCTTATACAGACAAGTTCACTCAGCTAAATCGGGGGAACCTTAGAGGGAGGGATTGGGAGGAAGTGGCGGCAATAGTTAGTGAGCGGTGCGAAAATCAAACCAAGAGTGTGGAGCAATGCAAGAATAAAGTCGATAATTTGAAGAAGAGGTATAAGTTGGAAAGGCATAGGATGACCAATGGCTGCATTTCGGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAACAGATCGTCGGCAATTCGCCATCTACAAAGTATGTGCACGATGAAGACAAGGGGATCGGTTCTGGGAGTAATTCGCCGAGACAACCAAAGAGATATGGAGTCATAATGCCCAGCAGTGGAGGTCAGCTAAATAGCTTGAAGCTAAAACCAATGTCAAATATTAGATGGAGAAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGCTACCTGCAACATTGACCCAAAGGTGGCCATGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAATGGTGTGGAGGTGGCAATAGTCGTTGGAGGCCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCAACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCTACTGTGATGAATTCTATATTGCTCCAATCAACTCTGGAGAAGATGGGTGTTCAAACTCGTGTGCAAACTACCATGGCCATGCATGAATTTGCTGAACCATACAATAGGCAGCGGGCCATTAGACATCTTGAGAAAGGCAGAGTTGTTATATTTGGTGGAATTGGTTTTGGCACTGGAAACCCACTCTATTCAACTGATTTTGCTGCAGCTCTCCGAGCTTCTGAGATTAATGCTGAGGCTGTTCTCAAGGGTACTAATGTTGATGGTGTTTATGACTGCAACTCCCGGGATGGCAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGTCAGCGCTGACATTCTGTGAGGAAAATTCTCTTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCTTTATGTGGAGAACAAGTTGGTACACTAATCGACCAAACCGGATCCATAAGCTGA	1443	0.4816	MASCDDDGFSLLSDDHHQSSSGPNHHLHQTYPPHSFSSAVTPVPSEPVADTSEVYGFDNDADESDKRNDREEAGEGTPSYGYKRPKLSNGGEYRKDREEWSDAAIVCLLEAYTDKFTQLNRGNLRGRDWEEVAAIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMTNGCISASHWPWFKQMEQIVGNSPSTKYVHDEDKGIGSGSNSPRQPKRYGVIMPSSGGQLNSLKLKPMSNIRWRRVVFKISGAALTGSATCNIDPKVAMLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTMAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNPLYSTDFAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMSALTFCEENSLPVVVFNLLEPGNISKALCGEQVGTLIDQTGSIS	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco02g1433	480	Pfam	Amino acid kinase family	243	453	IPR001048	-
	Acco02g1433	480	PANTHER	URIDYLATE KINASE	93	479	-	-
	Acco02g1433	480	FunFam	Uridylate kinase isoform A	233	479	-	-
	Acco02g1433	480	Coils	Coil	140	167	-	-
	Acco02g1433	480	MobiDBLite	consensus disorder prediction	195	215	-	-
	Acco02g1433	480	CDD	AAK_UMPK-PyrH-Ec	242	474	IPR015963	GO:0005737\|GO:0006221\|GO:0033862
	Acco02g1433	480	Hamap	Uridylate kinase [pyrH].	239	474	IPR015963	GO:0005737\|GO:0006221\|GO:0033862
	Acco02g1433	480	Gene3D	-	100	163	-	-
	Acco02g1433	480	SUPERFAMILY	Carbamate kinase-like	240	473	IPR036393	-
	Acco02g1433	480	MobiDBLite	consensus disorder prediction	14	45	-	-
	Acco02g1433	480	Gene3D	-	236	474	IPR036393	-
	Acco02g1433	480	MobiDBLite	consensus disorder prediction	1	95	-	-
	Acco02g1433	480	MobiDBLite	consensus disorder prediction	59	77	-	-
	Acco02g1433	480	FunFam	Aspartate/glutamate/uridylate kinase family protein	100	163	-	-
	Acco02g1433	480	Pfam	Myb/SANT-like DNA-binding domain	97	187	IPR044822	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco02g1433	Acco-ChrAcco02	10815985	10819533	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco02g1433	100	191	Trihelix Transcription Factor Family	AT3G14180	39.362	5.24e-17	81.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Acco02g1433		AA_kinase	2.3e-23	No_clan