Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1432 ATGAACAAGCCTTATGCATTGAACCTGGCTTTTGCCTTCGCCTTCACTTTGGCTTTCCTCTGTTTCACAACATCTCTGTGTTTAGCTCAGAATGACACCCAAGTGCTCACTCTGTTCCGCATCCAGACCGACGCTCATGGCTATCTCCTCTCTAATTGGACCGGAGGCGATGCCTGCTCCGCCACGTGGCGCGGAGTATATTGCTCCTCTAACGGCCGAGTCGTCGCCCTTTCTCTCCCTTCCCTCAATCTTCGAGGACCTATTGACTCACTCTCATCGCTTGAGCACCTCCGTCTCCTTGACCTCCATGACAATCGTTTAAACGGAAGCATTGCGCCTCTCTCCAACTGTACCCGCCTCAGGCTACTTTACCTCTCTCACAACGACTTCTCCGGCGAGATTCCGCCGGGAATAGCTTCTCTTAAGCATCTACTGAGGCTTGACCTTTCTGACAACAACATTCACGGTCCAATTCCGAACGAACTCTCTTCGTTAACTCACCTTCTCACGCTTCGCCTACAGAACAATGTGCTCTCTGGTCAAGTTCCGGATCTCTCTGTTTCGATCGTTAATCTAACAGAGCTCAATTTCACCAACAACGAGCTCTACGGACGCTTACCCGATGCAATGTTGAAGAAATTCGGCGACGAAACCTTCTCAGGGAATGAAGGTTTGTGTGGATCAACCCCATTCCCGGCTTGTTCCTTCACAGGGAGCCCTCCTTCTTCTGCATCACCGCCGCAGATAGTTCCTTCGAACCCTAGTTCGTTTCCTGAATCTCAAACAAGCGTAATTGCCAATCCCAAAACCCAACGGCGAAAGGGGTTAAGCCCCGGAGCTATAGTAGCCATAGTGGTGGCGAATTGCGTGGCGTTGTTGGTGGTAACATCTTTCATAGTGGCTCACTGTTGTGCAAGAGGACGAAGCTCAAACTCGATGGTGGGTAGTGAAAATGGGAAGAGAAAAAGCAGCAGTAGTGGCTCTGGAAGCGAGAAGAAGGGGCACGCCCATAATGGCGGGGCAGATAGCGATGGGACTAGCGGCACAGACCGAAGCAGGCTTGTGTTCTTCGATCGGATGAATCAATTCGAGCTGGAGGAATTGCTCCGAGCATCGGCGGAGATGCTTGGAAAAGGCAGCTTGGGGACGGTTTATAAGGCGGTGCTCGATGACGGTTCTTCGGTGGCGGTTAAGAGGCTTAAGGACGCAAACCCATGCGCCAGGAATGAGTTCGAGCAGTACATGGACATCATCGGAAAGGTCAAGCATCCCAACATCGTCAGATTCAGAGCATATTACTACGCCAAAGAAGAAAAACTTCTAGTCTACGACTATCTCCCTAACGGAAGCTTGCATTCTCTTCTTCATGGAAATCGAGGTCCTGGCAGAATTCCATTAGATTGGACCACAAGAATAAGCTTGGTGTTAGGTGCAGCAAGAGGACTGGCTCGAATTCATGCAGAGTACAATGCAGCAAAAATACCTCACGCAAACGTCAAAGCTTCGAACGTGCTTCTTGACAAAAACGGCGTCGCTTGCATCTCTGACTTTGGCTTGTCCCTATTACTGAACCCTGCTCACGCCATTGCAAGATTGGGCGGATACAGGGCTCCAGAACAAGAACAAGTCAAGAGACTGTCTCAGCAAGCAGACGTATACAGTTTCGGAGTCTTACTACTGGAAGTTCTCACAGGGAGAGCTCCGTCTCAGCATCCTTCACCGGCTCGACCTCGCGCCGACGAAGATGAACAAGAAGTGGATCTTCCGAAATGGGTTCGATCTGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTCTTGCGATACAAGAACATAGAGGAAGAGCTGGTTTCAATGTTGCATGTGGGGTTGGCTTGTGTGGCTTCACAGCCAGAGAATAGGCCAACCATGGCAGAAGTAGCTAAGATGATTGAGGAGATAAGGGTGGAACAATCTCCATTAGCAGAGGACTATGATGAATCGCGTAATTCACTCTCACCGTCCCTTGCCACCACTGAAGATGGCCTTCCTTGA 2043 0.5012 MNKPYALNLAFAFAFTLAFLCFTTSLCLAQNDTQVLTLFRIQTDAHGYLLSNWTGGDACSATWRGVYCSSNGRVVALSLPSLNLRGPIDSLSSLEHLRLLDLHDNRLNGSIAPLSNCTRLRLLYLSHNDFSGEIPPGIASLKHLLRLDLSDNNIHGPIPNELSSLTHLLTLRLQNNVLSGQVPDLSVSIVNLTELNFTNNELYGRLPDAMLKKFGDETFSGNEGLCGSTPFPACSFTGSPPSSASPPQIVPSNPSSFPESQTSVIANPKTQRRKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGRSSNSMVGSENGKRKSSSSGSGSEKKGHAHNGGADSDGTSGTDRSRLVFFDRMNQFELEELLRASAEMLGKGSLGTVYKAVLDDGSSVAVKRLKDANPCARNEFEQYMDIIGKVKHPNIVRFRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNAAKIPHANVKASNVLLDKNGVACISDFGLSLLLNPAHAIARLGGYRAPEQEQVKRLSQQADVYSFGVLLLEVLTGRAPSQHPSPARPRADEDEQEVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVASQPENRPTMAEVAKMIEEIRVEQSPLAEDYDESRNSLSPSLATTEDGLP 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1432 680 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 660 - -
Acco02g1432 680 Pfam Protein kinase domain 373 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1432 680 FunFam Nuclear pore complex protein NUP107 29 184 - -
Acco02g1432 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 652 IPR046959 -
Acco02g1432 680 FunFam pollen receptor-like kinase 1 340 445 - -
Acco02g1432 680 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Acco02g1432 680 CDD STKc_IRAK 376 650 - -
Acco02g1432 680 MobiDBLite consensus disorder prediction 237 272 - -
Acco02g1432 680 Gene3D Ribonuclease Inhibitor 25 110 IPR032675 -
Acco02g1432 680 MobiDBLite consensus disorder prediction 254 270 - -
Acco02g1432 680 SUPERFAMILY L domain-like 32 211 - -
Acco02g1432 680 ProSiteProfiles Protein kinase domain profile. 370 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1432 680 Gene3D Phosphorylase Kinase; domain 1 344 445 - -
Acco02g1432 680 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Acco02g1432 680 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Acco02g1432 680 Gene3D Ribonuclease Inhibitor 112 236 IPR032675 -
Acco02g1432 680 MobiDBLite consensus disorder prediction 309 347 - -
Acco02g1432 680 MobiDBLite consensus disorder prediction 309 332 - -
Acco02g1432 680 MobiDBLite consensus disorder prediction 655 680 - -
Acco02g1432 680 Gene3D Transferase(Phosphotransferase) domain 1 446 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1432 Acco-ChrAcco02 10813114 10815245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1432 25 676 Receptor kinase-like Gene Family AT2G36570 67.625 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco02g1432 Pkinase 4.3e-35 CL0016