Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1417 ATGCCCGGTAGAAGATCCAACTACACACTGTTGAGCCAAATTCCTGATGATCACAACGGTGGCGGAGCCGTGTCGTCTGGGACAGCTGCTACCTCTTCGTTGTTTGGTTCTTCATCTGGGGATGGAAAGAACATTAAAGGCAAGTTGAACAGAGGGTTCGATTGGGACTTGAGTACTGATCATAGAGTGACTCAGCATGGGAACCGGATCGGAAGTTTGTTTCCGATCGGGTTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGTGAAAGCTCGTTATCAGGAGAGTATTATGCTCCGACTCCATCTACCGCAGCCGCTAATGAGATCGATGCCTTTGGGTATCTGCATGATGATGGAGTCAGGCTTGGTGTTGGAGCCGACTTAAGACCGAAGTTAACGGAAACTACGGTGCGAACAGCGGGGTCGTCTTCAGGAAAAAGTTGGGCGCAGCAGACAGAGGAGAGTTATCAACTACAGCTAGCTCTGGCGCTTCGGCTTTCATCTGATGCAACCTGCGCTGATGATCCCAATTTTCTGGATCCCGTCCCGGATGAATCTGCATTAAGGTCGTCATCCTCAAGCTCTCCGGAAGCTCTGTCACATAGATTTTGGGTTAATGGCTGCTTATCATACCCCGACAAAATTCCTGATGGCTTTTTCTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGCACTGATCTCCAGGAAAATGGCCGAATTCCATCTGTTGAATCGCTGAAGTCTGTAGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAGCGTAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGCGCATAGTATTTCTTGTAGCAGTATAACCTCTAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCGAATGGGGGGTTCAGCATCTGTTGGCGAGGATGACCTTCTTTCTATTTGGAGGGAGTGCAGTAACGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCATCTGCAGACATCGTGCTACATTATTCAAAGTACTAGCTGACACCATTGATTTACCATGTCGGATTGCAAAGGGCTGTAAATATTGTTCTAGAGATGATGCTTCCTCTTGCCTAGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTAGGAAGCCCGGTTACTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTCCTTCACCCCTGTGCTTTCCAAGACTTAAATCGGCTGAACCTACAATTGATTTCAGGACACTGGCCAAACAGTATTTCTCTGATTGTCTATCCCTTGAGCTTGCTTTTGACAATAATTCTGCAGAACAGTTTGATGGGAAGTGCGGGGACAGAAATAAACCAAGGTCAATTACAAAGGAAAGCAGAAGAACAAAAGATCAAGGTTCTGAAGCATTTAATTCATGTAAACCTTCCCAGAACATTGCGGACTCTACTACTTTGGGCAAGGCTCCAATGCCTGTAAATGACAACCTATCTGTTGGCCATAGAGATATTATGAAGCCCTTATTGTTTACAAATCCAAATGTGAATGCTATCGAGGGTAGGCGGTTTATTGATGGAAGCCAACTGTTTCCTAGTAAACCTAACATAGAGTTAGGCCTTGATATGGAGGATTTGGACATTCCATGGAGTGATCTTGTTTTAAAAGAGCGAATAGGATCAGGTTCTTTTGGAACTGTACATCGGGCCGAGTGGGATGGCTCGGAGGTTGCTGTTAAAATTCTGATGGAACAAGAATTCCATGCTGAACGTTTCAAGGAATTTCTGAGGGAGGTTGCAATAATGAAGAGGTTGAGGCATCCAAACATTGTTTTATTTATGGGGGCAGTCACCCAGCCTCCAAATTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGCTGGGTGAAAGGGCTAGGCTCAGCATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCACAAACGTAACCCGCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTCTTGTAGACAAGAAATATACTGTTAAGGTCTGCGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTCTCATCAAAGTCAGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTACGTGATGAGCCATCAAATGAGAAGTCAGATGTTTATAGTTTTGGTGTAATATTGTGGGAGCTTGCAACTTTGCAACAGCCCTGGAGTAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACGAGATTTGAATCCTCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCCAATGATCCCTGGAAACGTCCTTCGTTTGGAAGTATCATGGATTCTTTGAGACCATTGATCAAACCCCCTACACCTCAACCTGGTCGTCCACCATTACTTTCCTGA 2526 0.4497 MPGRRSNYTLLSQIPDDHNGGGAVSSGTAATSSLFGSSSGDGKNIKGKLNRGFDWDLSTDHRVTQHGNRIGSLFPIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDAFGYLHDDGVRLGVGADLRPKLTETTVRTAGSSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESALRSSSSSSPEALSHRFWVNGCLSYPDKIPDGFFLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPCADSSLEVVLVDQRSDPSLKELQNRAHSISCSSITSKEVVDQLAKLVCNRMGGSASVGEDDLLSIWRECSNDLKDCLGSVVVPIGSLSVGICRHRATLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIRKPGYLWEPDSLLNGPSSISFPSPLCFPRLKSAEPTIDFRTLAKQYFSDCLSLELAFDNNSAEQFDGKCGDRNKPRSITKESRRTKDQGSEAFNSCKPSQNIADSTTLGKAPMPVNDNLSVGHRDIMKPLLFTNPNVNAIEGRRFIDGSQLFPSKPNIELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWDGSEVAVKILMEQEFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLGERARLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPAQVVAAVGFKGKRPEIPRDLNPQVAAIIEACWANDPWKRPSFGSIMDSLRPLIKPPTPQPGRPPLLS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1417 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Acco02g1417 841 Gene3D Phosphorylase Kinase; domain 1 562 647 - -
Acco02g1417 841 Pfam Ethylene-responsive protein kinase Le-CTR1 197 401 - -
Acco02g1417 841 SUPERFAMILY Protein kinase-like (PK-like) 555 822 IPR011009 -
Acco02g1417 841 CDD STKc_MAP3K-like 575 823 - -
Acco02g1417 841 MobiDBLite consensus disorder prediction 461 485 - -
Acco02g1417 841 SMART serkin_6 569 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1417 841 MobiDBLite consensus disorder prediction 461 505 - -
Acco02g1417 841 MobiDBLite consensus disorder prediction 486 505 - -
Acco02g1417 841 Pfam Protein tyrosine and serine/threonine kinase 570 823 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 FunFam Serine/threonine-protein kinase CTR1 648 833 - -
Acco02g1417 841 ProSiteProfiles Protein kinase domain profile. 569 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1417 841 PRINTS Tyrosine kinase catalytic domain signature 731 741 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 PRINTS Tyrosine kinase catalytic domain signature 684 702 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 PRINTS Tyrosine kinase catalytic domain signature 643 656 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 PRINTS Tyrosine kinase catalytic domain signature 750 772 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 PRINTS Tyrosine kinase catalytic domain signature 794 816 IPR001245 GO:0004672|GO:0006468
Acco02g1417 841 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 183 826 - -
Acco02g1417 841 FunFam Serine/threonine-protein kinase isoform 1 559 647 - -
Acco02g1417 841 Gene3D Transferase(Phosphotransferase) domain 1 648 832 - -
Acco02g1417 841 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1417 Acco-ChrAcco02 10660175 10667828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1417 1 836 MAP Kinase Kinase Kinase AT5G03730 66.978 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco02g1417 PK_Tyr_Ser-Thr 2.2e-70 CL0016