Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1412 ATGGATAGCTCGCGTAGACCGTTTGATAGATCGAGAGAGCCGGCTATCAAGAAACCCCGACTGACCGAGGAGCTCGAGCGTGGCCCGAATTACAGTCTACGACCGTTTCCGCAGCGACAAGTGGCTTCTGGAGTTAATTCATTGGCCCAGGCAAGGTTTAGGACGAATGACAGAGATTCCGAGAGCATTGAGTCTGGTCGCGGTGGATACCAGCCCCAACCGCTCCACCAAGAGCTTGTCAATCAGTACAAAACCGCACTTGCTGAGCTAACGTTCAATTCTAAACCGATAATTACCAACCTGACTATAATCGCTGGCGAGAATCTTTATGCCGCGAAGGCTATTGCTGCCACTGTTTGTGCTAACATTCTAGAGGTTCCCACTGAACAAAAGCTGCCATCTCTTTATCTTTTAGACAGTATTGTTAAGAATATTGGGCGGGACTATATAAAATACTTTGCTGCTAGACTACCTGAGGTATTCTGCAACGCATACAGACAGGTTGATTCTTCTGTCCATTCAAGTATGAGGCACCTTTTTGGAACTTGGAAAGGAGTCTTTCCTCCCCAGACCCTCCAGATGATTGAGAAGGAGCTTGGCTTCACTCCTGCTGTCAATGGTTCATCTTCTGCATCTACTCTTTCATCTACACTGAGTGATTCGCAGTCACAACGGCCACAACATAGCATCCATGTGAATCCTAAATATTTGGAGAGGCAGCGTCAGTCTGGCAGGAACATTCAGGGCTCTAATAGAGATTCGTTTAGTGATTCTGTTCCTGAAAAGGGCATTGATACATCCTATGGAGGCAATGAATACGGTTCTGAACTTCCTAGGAATTCAGGTTTGGGTATTGGAAGAGCTGGTGGCAGGACCTCTGAGTTAGCACGCGACAAAGCTTGGTACAAAGCAGGCAGCAATGCCGCAGACAGTATGCCTGTCCAAAGGAATGGTTTCAGTCTCAAGCGTAGTTCATCAAATCATGAAGCACCAAAGTCCATCAACTTGGATGAACACAATCAACCAACACAAAGCTTAACTAGCATAACGAGTAGAGTCTTGTCGAGTAGCTGGAAAAATTCTGAGGAAGAGGAGTACATGTGGGATGAGGTGAACGCAGGACTTACTGAGCATGGTGCATCCAATGTCTCTAACAGCTCGAGCAAAGATTGTTGGACTACTGATGATGACGATTCGGCTGTTGAAGGTCACCTTCTAAGCACATTCCGTGAAGATAGAGATGTATCCACTGAAATGAAACGCCTGCCTGCTTTTGGTCATGGGCCATCATTATCTTTGAAATCACAGCAGCTGTCATTTGATGAACTGAATCATAGGCCATGTTCTTCAGAAGGCATTGGATCCACTCTTGGTAGGTTGCCAAACATTATGAGTTCTTCTAACGTCAAAATGGGAAATCGGCCTTTCTTGTCAAATGCCACATTAGGATCGGCAGGAACGTTGCAACAACAGCAATTTCATTCTATGGGAGCAGAGTCTCCTTCTTTGCAGTCGCCTTTGCGACAACAGTCTCCATCACCACCAGTTAGTGTGCACCATCCTCATCAAATGCGGGTTTTGGCTGAGCAAGGCCATCCACAGACTCTTAAAATGTCTCAATTTTCTGGACGTCTACGGAGTCAAGATATTCAAGATTCAGCATCTGTCCTTCCACATACTGTTCAGGTTGGTAACTCACAGCGATCACATCAAAAGGACTTGCTGGGTCCATTGCCTTCAGTGTCTTCTTTCCAGCCAAGGCATCATAATGCAGCTTCGCAACCACAGCATCTTGGTTCTAATACTGAAGTGTCTGACATTAAGGAAAAGATGACCCACTCTAAAGAAACTTCAGAGCAGTCAACTACAAGTACTATGTTAGCTGCAGTTATGAAGAGTGGGATTTTCTCCAGTGGTCAGCCTGGTACAAGTTTCTTGGACAGAAGGAACCTTCCATTGAAAGCAGGGGTTCAGCCTACCCGGCCAAGTGGATCATCTCCTACAACATCAGTTTCTTCAGGGCCTGGGGTTGCATCTCCATCTCGATTAGGTCCTTCTAATGATGACTCATCTACTCTGCCAAAAGAATCTCGAGGAAAGGTTGGAGCCCCATCAAGGCTGCCTGCTCTACCACCAGCTTCCTCTACTGTGAGTAGCGCCTCAGCCAAGACCTCCAATGCCACTCATAATAAAGCTAGTCCAGTTTCAAACCTTTTAAACTCGTTGGTTGCAAAGGGTTTGATATCTGCAAAAATAGATCCAGCTACTGAGGTGCCAGCTGAGGTGCTGAATCGATTGGAAGATCAGAGCCAAAGCATCACCACCAGTAGTACTTTGCCAGCTGTTTCAGTTACTGATTCTGCAACTGTTCCTGTTTTATCTACCGGAGATGATCAACTTGCAAAAGGTTACTTGAGTCAATCAAATCCTACGGAAGTAAAAAATCTAATTGGCTTTGAGTTTAAGCCTAGTGTGATCCGGGAATTGCATTCACCTGTGATCAGAGAACTATTCTATGATTCCCCTCATCATTGCAGCATTTGTGGCCTTAGGCTTAAACATCAAGAACAATTTAATAGACACTTGGAGTGTCATGCTATGAGAGAAAGAGAACAAAGTGATGTATTGAAGGCCTCAAGGAGATGGTATTTGAGGTCAAGTGACTGGGTTGTTGGCAAGGATGCAGTTTCATCTGAGTATGAGAGTATTGATTCCATAGATTTACATGGCAATAAATCGGAAAGAAGTGAAGAGGATGCTAAGGTTCCATCTGATGAAGATCAGTGCTTATGTTTGCTGTGTGGTGAGTTGTTCGAAGATGTTTATTGTCAAGAAAGGGATGAGTGGATGTTCAAAGGGGCAGTTTACCTACCTGCCTCCAGTAATGATAGCGAGATGTATATTAACGTCTGTAGTAGAAGTGGTCCCATTGTTCACAGTTGGTGCTTAACGGAGAGCTCCATATCTAGCGCCCCTACAAGGTCTATGCCAAAATCGGCAACCCTAATTATGTCGCAGCTCAGATGTCCTGATGAAAAATGGCCAGTAATAGCGCCATGGCAGGGCTTGGTATAA 3075 0.4524 MDSSRRPFDRSREPAIKKPRLTEELERGPNYSLRPFPQRQVASGVNSLAQARFRTNDRDSESIESGRGGYQPQPLHQELVNQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCNAYRQVDSSVHSSMRHLFGTWKGVFPPQTLQMIEKELGFTPAVNGSSSASTLSSTLSDSQSQRPQHSIHVNPKYLERQRQSGRNIQGSNRDSFSDSVPEKGIDTSYGGNEYGSELPRNSGLGIGRAGGRTSELARDKAWYKAGSNAADSMPVQRNGFSLKRSSSNHEAPKSINLDEHNQPTQSLTSITSRVLSSSWKNSEEEEYMWDEVNAGLTEHGASNVSNSSSKDCWTTDDDDSAVEGHLLSTFREDRDVSTEMKRLPAFGHGPSLSLKSQQLSFDELNHRPCSSEGIGSTLGRLPNIMSSSNVKMGNRPFLSNATLGSAGTLQQQQFHSMGAESPSLQSPLRQQSPSPPVSVHHPHQMRVLAEQGHPQTLKMSQFSGRLRSQDIQDSASVLPHTVQVGNSQRSHQKDLLGPLPSVSSFQPRHHNAASQPQHLGSNTEVSDIKEKMTHSKETSEQSTTSTMLAAVMKSGIFSSGQPGTSFLDRRNLPLKAGVQPTRPSGSSPTTSVSSGPGVASPSRLGPSNDDSSTLPKESRGKVGAPSRLPALPPASSTVSSASAKTSNATHNKASPVSNLLNSLVAKGLISAKIDPATEVPAEVLNRLEDQSQSITTSSTLPAVSVTDSATVPVLSTGDDQLAKGYLSQSNPTEVKNLIGFEFKPSVIRELHSPVIRELFYDSPHHCSICGLRLKHQEQFNRHLECHAMREREQSDVLKASRRWYLRSSDWVVGKDAVSSEYESIDSIDLHGNKSERSEEDAKVPSDEDQCLCLLCGELFEDVYCQERDEWMFKGAVYLPASSNDSEMYINVCSRSGPIVHSWCLTESSISSAPTRSMPKSATLIMSQLRCPDEKWPVIAPWQGLV 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1412 1024 FunFam polyadenylation and cleavage factor homolog 4 72 200 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 563 601 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 654 733 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 239 261 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 659 692 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 1 27 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 51 71 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 211 290 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 321 348 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 1 39 - -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 711 733 - -
Acco02g1412 1024 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 59 991 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Acco02g1412 1024 MobiDBLite consensus disorder prediction 489 521 - -
Acco02g1412 1024 ProSiteProfiles CID domain profile. 75 203 IPR006569 -
Acco02g1412 1024 SMART 558neu5 78 200 IPR006569 -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 489 517 - -
Acco02g1412 1024 Pfam CID domain 84 194 IPR006569 -
Acco02g1412 1024 SUPERFAMILY ENTH/VHS domain 76 204 IPR008942 -
Acco02g1412 1024 ProSitePatterns Zinc finger C2H2 type domain signature. 845 865 IPR013087 -
Acco02g1412 1024 Gene3D - 72 200 IPR008942 -
Acco02g1412 1024 MobiDBLite consensus disorder prediction 211 230 - -
Acco02g1412 1024 CDD CID_Pcf11 80 192 IPR047415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1412 Acco-ChrAcco02 10624503 10632449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1412 800 987 C2H2 Transcription Factor Family AT4G04885 35.417 4.08e-31 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1412 02 10624503 10632449 Acco02g1412 02 10624503 10632449 ECH