Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1407 ATGGAAATGGAAGATCACCACAACAATCACCACCATCATCCCCAGCAATATGCCATCGCCGATCTCAGACACCTCATGAACGGAGCTTCCAGGTCCACTGCCACTCATTTCCCCTCCATTCCTCCCCAGCAGCCCACGGCGGAGCTCTTCCACCCTCACCGGAATCTCACTACCACCCACCATCACCACTACGACATGATGATGTTTGGTCGTCATGTCGCCGATGTAATGCCTCATCGTGCTCTCCACGACTTTTCCTCCGATTCGCCACCTGCCGCTGCTGCTCCTCCACCCACTGTAGCCACTCCGGCCACCACCGCCAGCGCTTTCACTCCTCCTCTCAGTGGCTTAGAGGCTGACACCCCAGGCTGCCTCACCGGGGATGCCTCCACCGGAAGATGGCCCAGGCAGGAAACACTCACTCTCCTTGAGATCAGATCTCGCCTCGACCCTAAATTCAAAGAGGCCAATCAGAAAGGTCCCTTATGGGACGAAGTCTCTAGGATCATGCGGGAAGAATATGGATACCAAAGGAGTGGGAAAAAATGCAGGGAAAAATTCGAGAACTTGTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCGAGGAGACAGGATGGGAAGCATTACAGATTCTTCCGTCAGCTTGAAGCTTTGTATGGAGGAAACAGCAACTCAAACTCAGTACCAGAAACCAATTATGGTGGCGGAAGCATTGGGTTTCAGACACCCTCCCAAACAAATCATCAAGAGATGTTTCAGTCCCACAACAACCACAATAAAACTTGTGATAGCCTCAGCCTTACAAACTCAACGGATTTCGGCACGTCATCATCGGAGGACAACAACAACCTTTGCAGCATGGAAAATGATTCAACGGAGAAGGGGGTGAGGAAGAGGAGTACTAGCGGCAGCGGAAGCAGGTGGAAGGCGAAAATAAAGGAGTTCATTGACTCACAGATGAAGAAGCTGATTGAGAAGCAAGAGGCGTGGATGGATAGGCTGGTGAAGACGCTCGAACAGAAGGAGAAGGAGAGAGTCTTAAGAGAGGAAGAATGGAGAAGACAAGAGGCCGCCAGGTTGGAAATGGAGCACAAGTTTCGTGCTAAAGAGAGAGCCTGGATTGAATCAAGAGATGCTGCTTTAATGGAGGCCTTGCAGAAACTAACAGGAAGAGAGGTAATAAAAGCTCAATCTCCTGTTGAGCAGGCTCTAATTATGGCTAATGACATTCATAGGGAAAACCAGAACGAAGAGGGAAGTGAAATCCTCAATGCCAAGGAAGGAGTTAAGAAGCGCAAGGAAGAGTCTAGAAGCTGTTTTTACTTTGAAAGCAACATCAACGACCACCCATCCTTGTATAACCAAGGAACCACACCGTACTGTGATATCAACGTTAACGATCATCAACGGCACGACAATGAGAGGCTACAAACAAATGATGGCTCTTCGCCTTCAAATTCCAATGCGGTTGCGGCTGACGTTAACTGCTTTCCCTTCTTTATTAGCACTGAAGGATCAGAAAATTTGTGGGAAAACTACGGCTTGAAGATTAATAAAGGAAACCAAAACCAGCTTGCGAATGGCTGGAGTCGCATTAATTTCGTGGTACTTGCACCATCAATAATGTCAAAATATATGTCATCATCAGTGAGCTAG 1659 0.481 MEMEDHHNNHHHHPQQYAIADLRHLMNGASRSTATHFPSIPPQQPTAELFHPHRNLTTTHHHHYDMMMFGRHVADVMPHRALHDFSSDSPPAAAAPPPTVATPATTASAFTPPLSGLEADTPGCLTGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMREEYGYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGGNSNSNSVPETNYGGGSIGFQTPSQTNHQEMFQSHNNHNKTCDSLSLTNSTDFGTSSSEDNNNLCSMENDSTEKGVRKRSTSGSGSRWKAKIKEFIDSQMKKLIEKQEAWMDRLVKTLEQKEKERVLREEEWRRQEAARLEMEHKFRAKERAWIESRDAALMEALQKLTGREVIKAQSPVEQALIMANDIHRENQNEEGSEILNAKEGVKKRKEESRSCFYFESNINDHPSLYNQGTTPYCDINVNDHQRHDNERLQTNDGSSPSNSNAVAADVNCFPFFISTEGSENLWENYGLKINKGNQNQLANGWSRINFVVLAPSIMSKYMSSSVS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1407 552 MobiDBLite consensus disorder prediction 82 132 - -
Acco02g1407 552 MobiDBLite consensus disorder prediction 273 291 - -
Acco02g1407 552 MobiDBLite consensus disorder prediction 273 306 - -
Acco02g1407 552 Coils Coil 325 352 - -
Acco02g1407 552 Pfam Myb/SANT-like DNA-binding domain 133 219 IPR044822 -
Acco02g1407 552 ProSiteProfiles Myb-like domain profile. 126 191 IPR001005 -
Acco02g1407 552 FunFam trihelix transcription factor PTL-like 134 196 - -
Acco02g1407 552 PANTHER FI21293P1 111 470 - -
Acco02g1407 552 CDD GT1 133 198 - -
Acco02g1407 552 Gene3D - 134 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1407 Acco-ChrAcco02 10595517 10598422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1407 431 520 Trihelix Transcription Factor Family AT5G03680 40.777 7.16e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco02g1407 Myb_DNA-bind_4 1e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1407 02 10595517 10598422 Acco02g1407 02 10595517 10598422 ECH