Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1403 ATGGACTTCCATCTCAAGCAATGGAAAAACCACCATGACTCTGAATCTGAAGACCAACATTTTGCGAAGATGCCCAGGCTCATGCTTGAATCCCATCTTCATTCTTCATCATCCCCCTCTTCCCTTGCTCTCCCTCTCTTTGTACCTGAACTCAACCCCAAAGTTAGCTCCCTATCCTCCCTTTCTGATTCCTCCTCATCACCCCCGCCCAGATTTCCAAGAATGGCAAGTTATTTCAGTGTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATGTTGGCGGGTGCTGCTGTTCCTCCTGATCTTCTTCTGCCAATTAGGAAGAACCTTCTTCATTCTGCTCCATATTTCCTCCATTACCAGCCTTCTCTGTTGCAATCGGGATACTGGGGAGGAGCTCCCATGGATCCGGAGCCCGGCCGCTGCCGGAGGACGGACGGCAAGAAATGGCGGTGCTCTAGAGACGTGGTGGCCGGCCAGAAGTACTGTGAGCGCCACGTGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACGCCAGCCACTGCGGGAGTCATTGGCTCTGCCACCGCCGGCTCCGGCGTGGGATGTCCCTCTGCCGCAACAGCCTCTGTATCTGCCCCGCACATGACTCCAACTGCGTTGAGATCCCCTTTCGATCTCCCTCAGCTGAATCGATGTTCATCTGGGACCATTAAGAAAGAAAAAGAGAGCGTGTTCGAAAATCGAAGTCGAGATAATGTGGACGGTGAAGGGAGATCAGATGGGCATATTCTGCGACATTTTTTCGATGACTGGCCGCGATCACTTCAGGAACCTGACAATGCCGAAAGTAACACCGGCTCCATCAGCTCAGCCACATGCCTCTCCATTTCAATGCCGGGAAAGGCTTCTTCGTCGGACGTGTCACTGAAATTGTCCACAGGCGACGATGCAGAGGATCCATGTCCCAGAAGTGGGAATGTGGGCCCACAGAATTTGCAGTTGAATCGGGCAGGAGGATGGGCTTCTTCGGCTAATCATGTGGCCTCAATGGGAGGACCACTCGCAGAGGCTCTCAGATCATCCACCACAACGTCTTCACCTACAAGTGTCCTACACCAGTTGCCCCGTGGTTCTGCATCTGAAACCAGCTTCATTAGTACCTAG 1173 0.532 MDFHLKQWKNHHDSESEDQHFAKMPRLMLESHLHSSSSPSSLALPLFVPELNPKVSSLSSLSDSSSSPPPRFPRMASYFSVAQWQELELQALIFRYMLAGAAVPPDLLLPIRKNLLHSAPYFLHYQPSLLQSGYWGGAPMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVEVPTPATAGVIGSATAGSGVGCPSAATASVSAPHMTPTALRSPFDLPQLNRCSSGTIKKEKESVFENRSRDNVDGEGRSDGHILRHFFDDWPRSLQEPDNAESNTGSISSATCLSISMPGKASSSDVSLKLSTGDDAEDPCPRSGNVGPQNLQLNRAGGWASSANHVASMGGPLAEALRSSTTTSSPTSVLHQLPRGSASETSFIST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1403 390 ProSiteProfiles QLQ domain profile. 78 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco02g1403 390 SMART QLQ_2 77 113 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco02g1403 390 MobiDBLite consensus disorder prediction 238 264 - -
Acco02g1403 390 ProSiteProfiles WRC domain profile. 141 185 IPR014977 -
Acco02g1403 390 MobiDBLite consensus disorder prediction 307 338 - -
Acco02g1403 390 MobiDBLite consensus disorder prediction 359 390 - -
Acco02g1403 390 Pfam WRC 142 184 IPR014977 -
Acco02g1403 390 Pfam QLQ 79 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco02g1403 390 PANTHER GROWTH-REGULATING FACTOR 5 56 307 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1403 Acco-ChrAcco02 10499679 10501577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1403 1 377 GRF Transcription Factor Family AT3G52910 47.558 1.10e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco02g1403 WRC 9.6e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1403 02 10499679 10501577 Acco06g0904 06 6061093 6063119 CCT
Acco02g1403 02 10499679 10501577 Acco02g1403 02 10499679 10501577 ECH