Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1399 ATGGATGGTGACATATTGCGACGTTGGGAGCCTTTCATTCACGAATTCGCCGCTCGTTTTCCTTTAATCACTCCGAACCGGATCTCCATATTCCCAGGTGACGATGCCCTGCTTTTGAATATGAAGGTGATTGCTGCGTACTTGCTCGCCGTGTTGGGTGGCAACACTGTCCCTTCCGCCGATGATATCAAACACATCCTTGGCTCTGTTGGAGCAGAAGCTGATGATGATAGAATTGAACTTCTTTTGTCTGAATTGAAGGGCAGAGATATAACGGAGGTTATTGCAAGTGGTAGGGAAAAGTTGGCCTCAGTGCCCTGTGGCGGTGGGGCTGCAGTTGCTGTGGCTGCTGCACCTGGAGCTGGTGGTGCCACCGCTGCTCCAGCAGCGGCTGAGTCAAAGAAAGAGGAAAAGGTGGAGGAGAAAGAGGAATCTGACGACGATATGGGCTTCAGCCTCTTCGATTAA 468 0.5107 MDGDILRRWEPFIHEFAARFPLITPNRISIFPGDDALLLNMKVIAAYLLAVLGGNTVPSADDIKHILGSVGAEADDDRIELLLSELKGRDITEVIASGREKLASVPCGGGAAVAVAAAPGAGGATAAPAAAESKKEEKVEEKEESDDDMGFSLFD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1399 155 Gene3D - 40 99 IPR038716 -
Acco02g1399 155 MobiDBLite consensus disorder prediction 124 155 - -
Acco02g1399 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Acco02g1399 155 Pfam 60s Acidic ribosomal protein 58 154 - -
Acco02g1399 155 CDD Ribosomal_P2 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Acco02g1399 155 Hamap 50S ribosomal protein L12 [rpl12]. 42 155 IPR027534 GO:0003735|GO:0005840|GO:0006414
Acco02g1399 155 FunFam 60S acidic ribosomal protein P2 39 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1399 Acco-ChrAcco02 10461471 10463818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1399 41 155 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.348 8.77e-32 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1399 02 10461471 10463818 Acco02g1399 02 10461471 10463818 ECH