Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1390 ATGGCAGAAGAGCAACGATGCCAAACTTCCGAAGGCCACCGGCTCTGCACCAACAATTGCGGCTTCTTTGGAAGTCCGGCCACGATGAACCTCTGTTCTAAATGCTACAGAGATTTATGTCTCAAGGAACAGCACCAAGCCTCTACAGAATCAACAATCGAAACTGCTCTCTCCTCGTCATCTGCCCCTGTGCCATCGCCGGCAGTGGAGTCTCTCCCTCCTCCGCAGACGTCAAAAGCTCCGGATGTTGCGGCGGACGCATCGATCTCGGCGCCGGCATCCTCCGTACCAGATGGGACGGTGGCGCAACCAAACCGATGTGCATCGTGTCGTAAAAGGGTCGGGTTTACCGGGTTCAAGTGCAAGTGCGGGATCACATTTTGTGGCGTCCACCGGTATCCGGAGAAACACGGGTGTTGCTTCGATTTTAAGGCGGTGGGGCGTGAAGAACTGAGTCGAGCGAATCCTGTGGTCATAGCGGAGAAGCTCCATAAGATTTAA 501 0.5469 MAEEQRCQTSEGHRLCTNNCGFFGSPATMNLCSKCYRDLCLKEQHQASTESTIETALSSSSAPVPSPAVESLPPPQTSKAPDVAADASISAPASSVPDGTVAQPNRCASCRKRVGFTGFKCKCGITFCGVHRYPEKHGCCFDFKAVGREELSRANPVVIAEKLHKI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1390 166 MobiDBLite consensus disorder prediction 51 66 - -
Acco02g1390 166 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Acco02g1390 166 FunFam Zinc finger AN1-type containing 6 82 162 - -
Acco02g1390 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 166 - -
Acco02g1390 166 Gene3D - 76 161 IPR035896 -
Acco02g1390 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 60 - -
Acco02g1390 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Acco02g1390 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Acco02g1390 166 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Acco02g1390 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Acco02g1390 166 MobiDBLite consensus disorder prediction 51 102 - -
Acco02g1390 166 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Acco02g1390 166 Gene3D - 1 63 - -
Acco02g1390 166 SUPERFAMILY AN1-like Zinc finger 100 161 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1390 Acco-ChrAcco02 10354726 10355226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1390 1 166 C2H2 Transcription Factor Family AT3G52800 55.882 1.68e-53 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1390 02 10354726 10355226 Acco06g0919 06 6149373 6149885 CCT
Acco02g1390 02 10354726 10355226 Acco02g1390 02 10354726 10355226 ECH