Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1345 ATGGAGAATATGGCACCAGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGAAGAAAAAGCTTGAGGGAGATCAGAGTGAGGACATCAACCGGGTTATACCGGTGCTTGACATTTATGAATATAATCCATGGGATCTCCCACAGGTGTCAGGAGAGGCGAGCCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGGCAAGAAAGCGAAGCTCGCGGAGGAAGACCAAGACGACTCACAACAACCGGCTACTGGAAGGCCACCGGATCTCCTAACCACGTTTATTCCTCTGAAAATCGAATCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCTCCCAGCGGCCACAAAACCGATTGGAAGATGAACGAGTACAAGGCCATCGTCAGCGCCGAACCATCCTCCACTCACCCACCCGATCCCCGGATAAGGGTGGAATACAGTGTATGCAGGGTGTACAAGAAATCAAAGTGCTTGAGAGCGTTCGATAGGAGGCCACCTCCAAGGAGGGAGATAATAATGGATTCATCTGGGGGTTCAGGCTCAACGTCTCAGCAGCAGCAACAAGTGCAAAACCCAGATGCATCGGGATCGTCATCAATGGGAGCGATAGGTATAGCAAGCTCTCCTGATGAGAGTTCATCGCTATCAGGGGGAGACCATAGTGGTGGTGGTGGTGGGCAGGCATCTCAGAGTGGGGAAGCGGTGGGTCAAATGGAGTTGGACGATGAGCCCTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGCCAAGCATGACTCAACCGAGTGA 819 0.5079 MENMAPGYRFYPTEEELISFYLKKKLEGDQSEDINRVIPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSENRIIGMKRTMVFYNGRAPSGHKTDWKMNEYKAIVSAEPSSTHPPDPRIRVEYSVCRVYKKSKCLRAFDRRPPPRREIIMDSSGGSGSTSQQQQQVQNPDASGSSSMGAIGIASSPDESSSLSGGDHSGGGGGQASQSGEAVGQMELDDEPLLDWEQVDWFLAKHDSTE 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1345 272 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Acco02g1345 272 MobiDBLite consensus disorder prediction 185 244 - -
Acco02g1345 272 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Acco02g1345 272 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Acco02g1345 272 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Acco02g1345 272 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 205 - -
Acco02g1345 272 MobiDBLite consensus disorder prediction 173 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1345 Acco-ChrAcco02 10093451 10095218 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1345 7 263 NAC Transcription Factor Family AT5G22380 46.693 8.77e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g1345 NAM 9.5e-32 No_clan