Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1343 ATGGAGAATATGGCACCAGGATATCGGTTCTACCCAACTGAAGAGGAACTCATTTCCTTCTATTTGAAGAGAAAGCTTGAGGGAGATCAGAGGGAGGACATCAACCGGGTTATACCTGTGCTTGATATTTATGAGTACAATCCATGGGATCTCCCACAGGTGTCGGGAGAGGCGAGTCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGGCAAGAAAGCGAAGCTCGCGGAGGAAGACCAAGACGACTCACAACAACCGGCTACTGGAAGGCCACCGGATCTCCTAACCACGTTTATTCCTCTGAAAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACAACGGAAGAGCCCCCAGCGGCCACAAAACTGATTGGAAGATGAACGAGTACAAGGCCATCAGCGCCGAACCATCCTCCGCTCACCCACCCGATCCCCGGATAAGGGTGGAATACAGTGTATGCAGGGTGTACAAGAAATCAAAGTGCCTGAGAGCGTTTGATAGGAGGCCACCTCCAAGGAGGGAGATAATAATGGATGCATCAGGGGGTTCAAGTTCAACGTCTCAGCAGCAACAAGAAGGGCAAAACCCAGATGCATCGGGATCATCGTCAATGGGAGCGATAGGTATAGCAAGCTCTCCTGATGAGAGTTCATCGTTATCAGGGGGAGACCATCATGGTGGTGGTGGTGGGCAGGCTTCAGAGAGTGGGGAAGCAGTGGGTCAAATGGAGTTGGACGATGAGCCCTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGCCAAGCATGACTCAACCGAGTGA 816 0.5086 MENMAPGYRFYPTEEELISFYLKRKLEGDQREDINRVIPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSENRIIGMKRTMVFYNGRAPSGHKTDWKMNEYKAISAEPSSAHPPDPRIRVEYSVCRVYKKSKCLRAFDRRPPPRREIIMDASGGSSSTSQQQQEGQNPDASGSSSMGAIGIASSPDESSSLSGGDHHGGGGGQASESGEAVGQMELDDEPLLDWEQVDWFLAKHDSTE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1343 271 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Acco02g1343 271 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 204 - -
Acco02g1343 271 MobiDBLite consensus disorder prediction 172 252 - -
Acco02g1343 271 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Acco02g1343 271 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Acco02g1343 271 MobiDBLite consensus disorder prediction 184 224 - -
Acco02g1343 271 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1343 Acco-ChrAcco02 10057352 10059098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1343 2 262 NAC Transcription Factor Family AT5G22380 45.833 4.64e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g1343 NAM 8.3e-32 No_clan