Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1336 ATGGAGCCCAACCCACAACTTGCTGGGCTTGCAGATGTCAACGAAGCCCGAGTACGAATGTATCCCTTCCCCGTCGCACTGCCGTTTCCTATGGCGGCGATCACAAGATTCATTGGCACCCGTTCTGCTTTGCCTCACTTCTCACTTGTTTCCCCTGCTCTCAGTAGAGGAATTTCCTACAAACTCTTCGTTGGAGGACTGTCATTTCTCACAACGGAGAAGGGATTGTCAGAAGCATTTTCTGATCACGGTCAAGTTGTTGAAGCAAAAATTGTGATGGACAAGGTATCAGATAGATCAAAAGGGTTTGGGTTTGTCACCTTTGCCTCAGCAGATGAGGCTGAGAATGCCATAACAGGGATGAATGGGAAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAATCCAATATCCGTGATGGAATGCCAATTGCTAGAGGACCTCCTGAACCAACAGCAGACTGTTAA 480 0.4729 MEPNPQLAGLADVNEARVRMYPFPVALPFPMAAITRFIGTRSALPHFSLVSPALSRGISYKLFVGGLSFLTTEKGLSEAFSDHGQVVEAKIVMDKVSDRSKGFGFVTFASADEAENAITGMNGKALNGRVIFVDYAKPKSNIRDGMPIARGPPEPTADC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1336 159 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 55 143 - -
Acco02g1336 159 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 62 131 IPR000504 GO:0003723
Acco02g1336 159 Gene3D - 51 144 IPR012677 -
Acco02g1336 159 SMART rrm1_1 61 134 IPR000504 GO:0003723
Acco02g1336 159 SUPERFAMILY RNA-binding domain, RBD 59 151 IPR035979 GO:0003676
Acco02g1336 159 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 60 138 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1336 Acco-ChrAcco02 9983284 9985147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1336 62 143 Eukaryotic Initiation Factors Gene Family AT1G49760 39.024 9.10e-13 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1336 02 9983284 9985147 Acco02g1336 02 9983284 9985147 ECH