Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1322 ATGAAGTTACCGTTTCTTGAAAAGAAGTCGACAGAAATGAGGTCTTCTTCTTCTTCGTGGCCGTGGCCATCTTGTCATCACCAACCCAGAACCCTCTCTTTCAGAGCCAACTCCGCCGAGATGTTCAGTACCGTCAACTCGGACCCCACACCAACGGAAGTCGACCCGGTAGAGACCGTGGTTCGCGGGTTGCGGTCGGACCGGAGGAGGCTGTTCTTCGAGCCGGACGAGACGAGCTCAATACTAGAGACAAAAGCTATCTCTGCAGGAGGACGCGTACCTTTCAAAGACAGCTTCGTGTTATCCATGGAATCTCGAGACCCTTACTTAGACTTCCGGAAGTCGATGGAGGAGATGATGGAGGCTCATGCCCTGAGGCACTTGGAGGCTCTTCAGGAGCTTCTGTGTTGGTATTTGAAGCTCAATGCCAAAAGCAATCACCTCTGTATTCTCTCTGCTTTTGTTGATCTATTGCTTGACCTTGCTCCTCCTCATTCTTCTCCTTGCGCTTCTTCTCCTTTATCCTTTTCTACTTCTTCGTCTCCGTCTTCTTCCTTTAGCACACACTGA 570 0.5035 MKLPFLEKKSTEMRSSSSSWPWPSCHHQPRTLSFRANSAEMFSTVNSDPTPTEVDPVETVVRGLRSDRRRLFFEPDETSSILETKAISAGGRVPFKDSFVLSMESRDPYLDFRKSMEEMMEAHALRHLEALQELLCWYLKLNAKSNHLCILSAFVDLLLDLAPPHSSPCASSPLSFSTSSSPSSSFSTH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1322 189 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 161 IPR038933 GO:0045892
Acco02g1322 189 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Acco02g1322 189 MobiDBLite consensus disorder prediction 168 189 - -
Acco02g1322 189 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g1322 189 Pfam Transcriptional repressor, ovate 105 161 IPR006458 -
Acco02g1322 189 NCBIfam uncharacterized plant-specific domain TIGR01568 101 162 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1322 Acco-ChrAcco02 9876377 9876946 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco02g1322 Ovate 8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1322 02 9876377 9876946 Acco06g0979 06 6529259 6529942 CCT
Acco02g1322 02 9876377 9876946 Acco02g3682 02 51992421 51993107 ECH
Acco02g1322 02 9876377 9876946 Acco02g1322 02 9876377 9876946 ECH