Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1303 ATGGTCGGGCGTCTCCTGAGGCTTGTTTCAGCACTCATTCTCTCGCTTGCTGTAGGGGGTTTTAGTGCCACTGATCCGAATGACGTTAAGATTCTCAACCAATTCAGGAAAGGCTTGGACAACCCGGAGCTTCTGCCGTGGCCTGAAGATGGTGGAGACCCATGTGGGAGCCCTACTTGGAAGTACATCTTCTGCAAGGGAGATAGAGTTTCCCAGATTCAGGCTAAAAACTTGAACTTGAGTGGTCCTCTGCCTCAGAATTTCAACAAGCTCTCCATGCTTGAAAACATTGGCCTTCAGAACAACAAACTCAACGGGCCATTACCGTCTTTCAGTGGGTTATCCAATTTGAGATATGCATACTTGGACTACAATGACTTCGATTCCATCCCTGCTGATTTCTTTGACCGGCTAATGAGCCTGGAAGCCCTGGCATTGGATTATAATAATTTTAATGCCAGTACTGGGTGGCAATTTCCCCCTCATTTGCAAGATTCATCACAGTTAACCAATCTTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCGAGCTTTCTGGGGAATCTGTCTTCTCTGTCTGTCCTGAAGCTTTCAAACAACAATTTAACTGGTGAAATTCCGGCAACTTTAAGTGGTTCGATTTTGCAGGTTCTGTGGTTGAACGATCAGCAGAACGGTGGCATCACTGGTTCTATTGATGTGGTGGCAACTATGACTTCGCTTACGAGTCTGTGGCTTCATGGAAATCACTTCACGGGGACGATTCCTAAGAACATTGGGGATTTAACTTCTCTCAAGGATTTCAATCTCAATTCTAACCAGCTCGTTGGCCAAATCCCAGATGCTTTGAGTAAAATGAAACTCGACAGTCTTGATTTGAACAACAACCACCTAATGGGACCGATCCCAACTTTCGCAGCAGGCAAAGTTTCATGCGATAATAATTATTTTTGTCAACCCAAACCTGGGGCTCTTTGTGCCTTTGAAGTCATGGCACTTCTGGATTTTCTGGATGGGTTGAATTATCCTTTAAATCTTGTTGAATCCTGGTCTGGTAATGACCCATGTAATGGTCCATGGCTGGGACTAAAATGCGATGCTTCTGGAAAGGTGTCAATGATTAATTTGCCTAAATTTAAACTCAATGGCACTCTAAGCCCCTCAGTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGAGAGCAACAATCTGAGTGGTCAAATACCTAGTAATTGGAGTAGTTTGAGTTCTCTGACACTGTTGGATCTCAGTGACAATAACATTTCCCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTTGTCGATGCTGGGAACTCTTTATTGAATGGGAACCCAGAGGCCCCTTCATCGGGGAACAGCTCATCTTCTGGGAATTCTAGTCCTTCAAGTGATACTCCATCCCCATCAACACGCACAAATCCCAGTCCCAATACTACTGCTAGATCACAAAATTCCAGCAGGAAAATTTTGGTTGCAATTGTAGCCCCTGTTGCAGGTGTTGCGGCAGCAGCTTTTCTGCTCATTCCCCTGATATATTGTTACAAGAGGAGAAAAGATAGCTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGACCGTACGGTGAAAATTGCTGTGGCTAACAATACCTATGGAAGCATGTCCACATTAACTGGGAGTGGATCACAAAGTAGAAACAGCAGTGGAACCGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTCCTTCGAAATGTGACTAAGAACTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTCGTATATAAGGGAGAATTGGATGATGGGACTAAAATAGCTGTGAAAAGAATGGAAGCTGGTATAATCAGTAACAAGGCGTTGGATGAATTTCAGTCTGAAATTGCAGTTCTATCAAAAGTTAGACACCGTCATCTAGTGTCTCTCCTGGGTTACTCTGTTGAAGGTAATGAAAGAATTCTAGTTTATGAGTACATGTCACAAGGGGCTCTCAGCAAACATCTTTTTCAATGGAAGAGCCTTAAGTTGGAGCCACTTTCTTGGAAAAGGAGGCTCAATATTGTATTGGATGTTGCTAGAGGAATGGAGTATCTCCATAGTCTGGCTCATCAGAGCTTCATTCACAGGGATCTTAAGCCCTCCAATATTCTGCTTGGGGATGATTTTAGAGCCAAAGTCTCAGACTTTGGATTGGTTAAACTTGCTCCTGATGGTGAAAAATCTGTAGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACGGGAAAAATCACAACCAAAGCAGATGTCTTTAGTTTTGGAGTTGTGCTAATGGAATTGTTGACTGGGTTGACGGCACTCGATGAGGATAGACCTGAGGAAAGCCAATACTTGCCTGCATGGTTCTGGCATATAAAATCTGATAAGGAGAAACTTATGGCTGCTATTGATCCATCACTTGACAAAAAAGAAGAAACTTTTGAGAGTATCACTATCATTGCGGAGCTAGCTGGTCACTGCACTGCAAGAGAACCAAGCCAGCGACCAGATATGAGCCATGCTGTGAATGTTCTGGCTCCACTCGTTGAAAAATGGAAACCCTTTGATGATGACACCGAGGAGTATTCTGGAATTGATTATAGCCTACCCCTTAATCAGATGGTGAAAGGTTGGCAAGAGGCAGAAGGAAAGGACTTGAGTTACATGGACCTGGAAGACAGCAAGGGTAGTATCCCCGTAAGGCCAACTGGATTTGCAGATTCTTTTACATCTGCTGACGGCCGCTAA 2853 0.4427 MVGRLLRLVSALILSLAVGGFSATDPNDVKILNQFRKGLDNPELLPWPEDGGDPCGSPTWKYIFCKGDRVSQIQAKNLNLSGPLPQNFNKLSMLENIGLQNNKLNGPLPSFSGLSNLRYAYLDYNDFDSIPADFFDRLMSLEALALDYNNFNASTGWQFPPHLQDSSQLTNLSCMSCNLAGPLPSFLGNLSSLSVLKLSNNNLTGEIPATLSGSILQVLWLNDQQNGGITGSIDVVATMTSLTSLWLHGNHFTGTIPKNIGDLTSLKDFNLNSNQLVGQIPDALSKMKLDSLDLNNNHLMGPIPTFAAGKVSCDNNYFCQPKPGALCAFEVMALLDFLDGLNYPLNLVESWSGNDPCNGPWLGLKCDASGKVSMINLPKFKLNGTLSPSVANLGSLVEIRLESNNLSGQIPSNWSSLSSLTLLDLSDNNISPPLPHFSSKLKLVDAGNSLLNGNPEAPSSGNSSSSGNSSPSSDTPSPSTRTNPSPNTTARSQNSSRKILVAIVAPVAGVAAAAFLLIPLIYCYKRRKDSSLAPSSLVIHPRDPSDSDRTVKIAVANNTYGSMSTLTGSGSQSRNSSGTGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGIISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHLFQWKSLKLEPLSWKRRLNIVLDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLTALDEDRPEESQYLPAWFWHIKSDKEKLMAAIDPSLDKKEETFESITIIAELAGHCTAREPSQRPDMSHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKGSIPVRPTGFADSFTSADGR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1303 950 Gene3D Ribonuclease Inhibitor 25 324 IPR032675 -
Acco02g1303 950 FunFam receptor protein kinase TMK1 682 899 - -
Acco02g1303 950 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Acco02g1303 950 SMART serkin_6 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1303 950 MobiDBLite consensus disorder prediction 452 494 - -
Acco02g1303 950 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Acco02g1303 950 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Acco02g1303 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Acco02g1303 950 Pfam Protein tyrosine and serine/threonine kinase 607 879 IPR001245 GO:0004672|GO:0006468
Acco02g1303 950 CDD STKc_IRAK 610 883 - -
Acco02g1303 950 FunFam Receptor-like kinase TMK4 26 324 - -
Acco02g1303 950 ProSiteProfiles Protein kinase domain profile. 604 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1303 950 MobiDBLite consensus disorder prediction 448 494 - -
Acco02g1303 950 SUPERFAMILY Protein kinase-like (PK-like) 579 880 IPR011009 -
Acco02g1303 950 FunFam receptor protein kinase TMK1 566 681 - -
Acco02g1303 950 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Acco02g1303 950 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
Acco02g1303 950 SUPERFAMILY L domain-like 59 441 - -
Acco02g1303 950 SMART LRR_typ_2 114 137 IPR003591 -
Acco02g1303 950 SMART LRR_typ_2 417 441 IPR003591 -
Acco02g1303 950 SMART LRR_typ_2 263 287 IPR003591 -
Acco02g1303 950 SMART LRR_typ_2 239 262 IPR003591 -
Acco02g1303 950 SMART LRR_typ_2 190 214 IPR003591 -
Acco02g1303 950 SMART LRR_typ_2 393 416 IPR003591 -
Acco02g1303 950 MobiDBLite consensus disorder prediction 930 950 - -
Acco02g1303 950 Gene3D Phosphorylase Kinase; domain 1 565 681 - -
Acco02g1303 950 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Acco02g1303 950 PANTHER OSJNBA0070M12.3 PROTEIN 11 950 - -
Acco02g1303 950 Gene3D Transferase(Phosphotransferase) domain 1 682 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1303 Acco-ChrAcco02 9731372 9734722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1303 75 885 Receptor kinase-like Gene Family AT5G07280 31.614 2.23e-87 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Acco02g1303 PK_Tyr_Ser-Thr 3.4e-47 CL0016