Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1286 ATGGCCATGCAAACTGTTTATTTCAAAGAAGCTGAAGGAACTACCCATAATTCCGCCGGCCATATGTCATCTGTAACTTCTGTTTCCTGGTGGGGCACGTTAGGGTCCCAAACAATTTTTGGCGACTCTTGTGGCCAAATGAAACCTTTTTCACTGGAGATTCCTAACTATGCAGACCAACTTGCTGCCAATAAGCAAGCAGGAAGAGGAGGTGAACAAGTGTTTGATAAAGGACACACCACCCAGTTCGCTATTTTTTCTGATGATTGTAAAATGTCAGGTGATCAGAAGTCTCAAACTGGCATATCACTTCAGTCATCAATTCCTGATCCCCACACTCGTCTTGAGCTGGGAATTAATCAGCCTGTGATCTGTGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCAGCTTATGGACCTCAAATTCCGGGCCGTATGATGCTGCCACTTAACATGGCATCTGATGATGGACCGGTTTATGTTAATGCTAAGCAGTACCATGGAATCATCCGGCGTCGGCAGTCCCGCGCAAAGGCTGTGATGGAGAATAAATTGACCGCACGTCGTAAGCCTTATATGCACGAATCACGCCATCTCCATGCAATGCGCCGCCCAAGAGGATGCGGTGGTCGGTTCCTGAACGTGAAAAACTCGAAGAACGGTGGCAACGCAAGAAGTGGAAGTGAAGGGAACAAAACTGGTGATGGTCAATTGTTGTCCACTGGTTCTCAAAGCTCTGAATTGCTGCAGTCATCAAAGGACACAGGAGGCAGTAGTCCTCACATGTGTGGGTCAGAGGTAACTAGCATGTACACAAGGGGAGGTCTTGATCACGGCTTCCCATTCAACCATCTTGGACCAGCTGTTCATCACACTCTTGCAGGCATGATGGATGGTCACGGCGGCGGCGGCGGCGGCGGCGGCGGCATGGTTATGCCCACCGAATGGGTTGCAGCACCAGGAAAATGCTGCAGCCTTGAAGTTTGA 996 0.4869 MAMQTVYFKEAEGTTHNSAGHMSSVTSVSWWGTLGSQTIFGDSCGQMKPFSLEIPNYADQLAANKQAGRGGEQVFDKGHTTQFAIFSDDCKMSGDQKSQTGISLQSSIPDPHTRLELGINQPVICAKYPYMDQFYGLFSAYGPQIPGRMMLPLNMASDDGPVYVNAKQYHGIIRRRQSRAKAVMENKLTARRKPYMHESRHLHAMRRPRGCGGRFLNVKNSKNGGNARSGSEGNKTGDGQLLSTGSQSSELLQSSKDTGGSSPHMCGSEVTSMYTRGGLDHGFPFNHLGPAVHHTLAGMMDGHGGGGGGGGGMVMPTEWVAAPGKCCSLEV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1286 331 MobiDBLite consensus disorder prediction 219 269 - -
Acco02g1286 331 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 161 215 IPR001289 GO:0003700|GO:0006355
Acco02g1286 331 Gene3D - 158 220 - -
Acco02g1286 331 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Acco02g1286 331 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Acco02g1286 331 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
Acco02g1286 331 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
Acco02g1286 331 MobiDBLite consensus disorder prediction 207 269 - -
Acco02g1286 331 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 66 263 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1286 Acco-ChrAcco02 9559788 9563343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1286 1 331 CCAAT-HAP2 Transcription Factor Family AT3G05690 38.889 2.59e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Acco02g1286 CBFB_NFYA 1.1e-25 No_clan