Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1278 ATGACCCGTTTCTCAGAGAAGATCCGCCTCTCTTCTCTGGTCGTCAAACCGACCCGTCTTCTCTCTCAGAAGCTTACTCTCTTCTCTCTCTCCACCTTCCATCTCTGCAAGTCCCTTGCTCGCTCCATACTCTCCAAAACTCTCTCCTTCCTCGCCATGGACACTTTATTCTCGGATCGCAACGATTTCTTTTGGGACCTCGATTCCCGCCCCCAACGTCGCTTTGTCCGAGACGAAGAGCCTCAATTGGAGAATGAGCCCCTCTACTTGGTTCTTTACGGGTGGTGGAAGGAAGTACAAGGGGATGCTGATCGAGTAGAACATGTCCTATACACAGTATCATCGAACTCTGATTTTGAGTGCGACTCAGAAATTTTGCTTAAGTTAAGGAAGGAAAACGACCGGGAGGAAACGATGAATAGTGATGTGGGATCTTCAGGCCGTCAATATGCGTTGGTTCCTGAAGGTTCGTGGTTGTGTGCTCTTAAAAGGTGTAGTGATAATAATAATGCAGTGAAGGATTTTGGGAGCCTCTTCTTTGCAGATGATTATTTGCCAGATTTGTTTTCCTTGCAAATTAGGATATTTGTTTCATGGGAAACAAATTCATTGGAGGCAAAGATAAGCCAAAAGGAAAATGGGGTTGATGTCTACATGAAAGCCCGCAATATTTTCAGCTCTGAATGTAACCCAGTACACATTTTGGACTTCTCAGGCCAGACAGCTCAGTTTTTCATAGACAATAGTGAGGATTCTGGGCAACTTGAAAAAGGGGTTCTCCTGGAGCTGCAAGTTTATGGACTTTCTGATTCTATAAAGATTAATGGAAGCAATGATATGTTTGTAGATGGACCTATGGTGGGATGTTCGTACCATGGTGGCTCTGTTATTATGAATGGGACCACTCACAATGTGAATTCTAATGTAACAACTATCAACTCCTTTCAAAGGAGCAGCTATAAATCAGTTGGTTCTTTGGGCTTGAAAGGATTGCAGAATCTTGGAAACACTTGTTTTATGAACAGTGCCATCCAATGTCTGGTTCACACCCCCAAGCTTGTTGACTATTTCCTGGGAGATTACCGGAAAGAAATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGGGATTTACTTAGAAAGTTGTGGTTTCCTGGAGCAAGGCCTGTGGCACCAAGAATGTTCAAGATGAAGCTTGCTAATTTTGCCCCCCAATTTAGCGGTTATAACCAGCATGATTCTCAAGAACTTCTCGCTTTTTTGTTGGATGGACTCCATGAAGACCTTAATCGTGTAAAGCGTAAACCGTATCATGAAGTTAAAGATGAAGATGGTCGTCCCGATGAAGAAGTGGCAGAAGAATATTGGCATAATCACCTTGCTCGCAACGACTCCATAATAGTTGATTTATGCCAAGGTCAGTTCCGTTCAACATTGGTATGCCCTGTTTGCAAGAAGGTTTCTATCACTTTTGACCCTTTTATGCACCTATCTTTGCCATTACCTTCCACAACAATGCGGACAATTACTTTGACTGTCCTGAGCACTGATGGAACTGCCCTGCCTTCCACATTTACCATAACCTTAGCCAAGAGTGGATTATTGAAGGATCTAATCGAGGCCTTAGGTGATGCATGTTCCTTGACAGATGATGAGACACTCTTGGTAGCTGAGATATATAAGAATCGCATCTTTAGTTGGTTGGAGGAACCATCTGGTTCATTAGCATTGATCAGAGATCAGGACAAACTAGTTGCATATCGATTGCCAAAAGCTGAGGCTGGCCCCTTGGTTGTTTTCACGCATCAGCCGGTGACGAAGCAGGGCACTTCCGGGAGTGAGAAGTTGGCAGAAAGTTTGGCCATTCCTATTGTGGCAAGGTTGCCCAATGTTTCCTGTGGATATGACATTCATAGGGAGTTTCTGAAGTTAATTAATCCATTTCAGATGCCCTCAGAAGATTTCTTAGATGAGCATGATAATGATATTGAAGTTGGTAAAGATAATGAGTTGAGTGATGCCACTAGTTCTGTGTGTTTGGAAGGTGATTCAGATTCAGATTTGGAGGTTGACTTTAAATTCTACTTAATTGCACCACCACTAGGAATGGAGAATGTTGAGATAAAAAAGAATGAACCCTTACCATTCCCACGGCTGCCCAAAAGGTTGGAGGTTTCTGTCTTATGGTCAGATAAGATGATAGAAAAATATGATACATGCCTACTCAACTCATTGCCTGAGGTTTTCAAGCCACAGTTATTCTCCAGGAGAACACAAGAATCTGTTTCTGTTTACAAGTGCCTTGAAGCATTCTTAAAAGAGGAGCCTCTTGGGCCAGATGACATGTGGTTCTGTCCTAAATGCAAAAAGCCTCAGCAAGCGACCAAAAAACTAGATCTTTGGAGATTACCTGAAATTCTTGTTATTCATTTGAAGAGGTTCTCATTCAGCCGATACTTCAAGAACAAGCTGGAGACATTTGTTGACTTCCCGATCAATGATTTGGACCTGTCAACTTATGTCACCCATAAGAATAGCCAGTCTTCCCCCCATTATGAGTTGTATGCAATCAGCTGTCATTATGGATGCTTGGGAGGAGGTCATTATACAGCATTTGTTCGTTATGGACGTGATAAATGGTACGAGTTTGATGATAGCAGGGTTGTGCCTATCAGCGAGGACATGGTAAAGACTTCTGCTGCTTACGTTCTTTTCTATAGGAAAGTTTAG 2748 0.4261 MTRFSEKIRLSSLVVKPTRLLSQKLTLFSLSTFHLCKSLARSILSKTLSFLAMDTLFSDRNDFFWDLDSRPQRRFVRDEEPQLENEPLYLVLYGWWKEVQGDADRVEHVLYTVSSNSDFECDSEILLKLRKENDREETMNSDVGSSGRQYALVPEGSWLCALKRCSDNNNAVKDFGSLFFADDYLPDLFSLQIRIFVSWETNSLEAKISQKENGVDVYMKARNIFSSECNPVHILDFSGQTAQFFIDNSEDSGQLEKGVLLELQVYGLSDSIKINGSNDMFVDGPMVGCSYHGGSVIMNGTTHNVNSNVTTINSFQRSSYKSVGSLGLKGLQNLGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEINYENPLGMNGELALAFGDLLRKLWFPGARPVAPRMFKMKLANFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDEDGRPDEEVAEEYWHNHLARNDSIIVDLCQGQFRSTLVCPVCKKVSITFDPFMHLSLPLPSTTMRTITLTVLSTDGTALPSTFTITLAKSGLLKDLIEALGDACSLTDDETLLVAEIYKNRIFSWLEEPSGSLALIRDQDKLVAYRLPKAEAGPLVVFTHQPVTKQGTSGSEKLAESLAIPIVARLPNVSCGYDIHREFLKLINPFQMPSEDFLDEHDNDIEVGKDNELSDATSSVCLEGDSDSDLEVDFKFYLIAPPLGMENVEIKKNEPLPFPRLPKRLEVSVLWSDKMIEKYDTCLLNSLPEVFKPQLFSRRTQESVSVYKCLEAFLKEEPLGPDDMWFCPKCKKPQQATKKLDLWRLPEILVIHLKRFSFSRYFKNKLETFVDFPINDLDLSTYVTHKNSQSSPHYELYAISCHYGCLGGGHYTAFVRYGRDKWYEFDDSRVVPISEDMVKTSAAYVLFYRKV 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1278 915 CDD Peptidase_C19R 743 913 - -
Acco02g1278 915 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 858 875 IPR018200 GO:0004843|GO:0006511
Acco02g1278 915 Gene3D Cysteine proteinases 724 915 - -
Acco02g1278 915 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 329 915 IPR028889 -
Acco02g1278 915 Pfam Ubiquitin carboxyl-terminal hydrolase 330 912 IPR001394 GO:0004843|GO:0016579
Acco02g1278 915 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 270 914 - -
Acco02g1278 915 SUPERFAMILY Cysteine proteinases 327 914 IPR038765 -
Acco02g1278 915 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 330 345 IPR018200 GO:0004843|GO:0006511
Acco02g1278 915 Gene3D Cysteine proteinases 313 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1278 Acco-ChrAcco02 9494807 9502223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1278 766 915 Miscellaneous Gene Families AT2G24640 34.641 3.57e-18 87.0