Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1273 ATGGAAAATGAAACCCTCAAATATTTCCAGACAATTGTTTCGGCACTTTTCTTGAAGCATTCTCTCAGTTCTTGTCTGCTGGACGCTCAGAACCAAAAAAGCCACTCTTTTGAAATGGGAAACAACTGTGTTGGATCAAGAATCTCCAGGGATGCATTATTTAGCTCCATTTCCAATTCACTTTGGTGGTCACGACCAACTGGGGATATGGTTTCTCCTACCAGTAAATCATCCTCCAGAAGCGAAGGTCCAAATGTTTCAGACATTGTTCAAAACAGCCCACCCGAGGTATTCAGAATCCATGAGGTAGAGACGAAACCGATACCGGAGATAAAACCACCTCAACCTCAAAAGCAGGACAAAGAGATCATATCTTCCAAACCACAAAAACAGGACGAAGAAATTATATCTTCCAAGCCTGCAATGGAGAAACCAGAACTACCACAGTCGATGAAGCTGAGGCACGTGGAAGAGGGTGGACCAATTCCGATGAATGTACAGAAGGAAGAGATTGTTCAACAAGTGGAACCTACAAAACCAAAGAAGCCCCACAAGGTGAAGAGGTTCGCATCAGCTGGGCTGCGAGCAGATTCTGTTTTGCAGACAAAAACTGGTCATCTTAAAGAGTTTTATAAACTGGGACGAAAGCTTGGACGTGGACAATTTGGAACGAGTTTCCTTTGTGTGGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAGTCCATTGCAAAGCAAAAATTGCTAACGCATGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTAGCAGGATGTCCAAATGTGATATCCATAAAAGGGGCTTATGAGGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGAAGGGGGCGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTATAATGAAAAAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGTGTTATAGAAGCTTGTCACTCCCTTGGAGTCATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTTGTTAGTAAGGATGAAGATTCCCCCCTTAAGGCTATCGATTTTGGATTGTCCACATTTTTCAAACCAGGACAAACTTTCGCGGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGAGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAGGAGGTTTTGGATGGGAATCTTGATTTCTCGTCAGATCCTTGGCCTAAAATATCGGACAGTGCTAAAGATTTAGTGAGAAAGATGCTCACTAGAGATCCAAGAAAACGTATAACTGCTCATGAAGTTCTTTGCCATCCTTGGATACGAGTTAATGGCGAAGCTCCAGATAAACCTCTTGATTCAGCAGTCTTGAGTCGCCTAAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCCATAAGAGTGATTGCAGAGAAGCTCTCCGAAGAAGAAATAGCTGGGTTGAAAGAAATTTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACGTTTAATGAACTAAAGAATGGCCTTAAAAGATTTGGTGCTGATCTGAATGAATCAGAAATAGAAGATCTTATGCAAGCAGCAGATGTTGATAACAGTGGAACAATAGACTACAAAGAATTCATAGCAGCCACATTGCATTTAAATAAAATTGAGAGGGAAGACCACTTAGTTGCAGCTTTCTCATACTTCGATAAAGATGGAAGCGGCTATATCACTCCAGATGAGCTTCAACAAGCTTGCCAAGAATTTGGTATAGAAGATTTCCACTTAGAAGAAATTATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGTGGCAATGATGCAGAGAGGGAACTCAGAGATAGGGAAAAAGGGTCAAAGAGGTAGCAATAGATTTAAGATTGGATATAGGGAGGCTCTATCAGTGTATTAA 2031 0.4141 MENETLKYFQTIVSALFLKHSLSSCLLDAQNQKSHSFEMGNNCVGSRISRDALFSSISNSLWWSRPTGDMVSPTSKSSSRSEGPNVSDIVQNSPPEVFRIHEVETKPIPEIKPPQPQKQDKEIISSKPQKQDEEIISSKPAMEKPELPQSMKLRHVEEGGPIPMNVQKEEIVQQVEPTKPKKPHKVKRFASAGLRADSVLQTKTGHLKEFYKLGRKLGRGQFGTSFLCVEKATGKEYACKSIAKQKLLTHEDVEDVRREIQIMHHLAGCPNVISIKGAYEDPVAVHVVMELCEGGELFDRIVERGHYNEKKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGQTFADVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFKEVLDGNLDFSSDPWPKISDSAKDLVRKMLTRDPRKRITAHEVLCHPWIRVNGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDTDNSGQITFNELKNGLKRFGADLNESEIEDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEEIIREADQDNDGQIDYKEFVAMMQRGNSEIGKKGQRGSNRFKIGYREALSVY 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1273 676 Gene3D - 494 653 - -
Acco02g1273 676 Pfam EF-hand domain pair 517 577 IPR002048 GO:0005509
Acco02g1273 676 Pfam EF-hand domain pair 588 648 IPR002048 GO:0005509
Acco02g1273 676 ProSitePatterns EF-hand calcium-binding domain. 631 643 IPR018247 -
Acco02g1273 676 Gene3D Phosphorylase Kinase; domain 1 213 296 - -
Acco02g1273 676 ProSiteProfiles EF-hand calcium-binding domain profile. 512 547 IPR002048 GO:0005509
Acco02g1273 676 MobiDBLite consensus disorder prediction 65 92 - -
Acco02g1273 676 ProSiteProfiles EF-hand calcium-binding domain profile. 622 653 IPR002048 GO:0005509
Acco02g1273 676 ProSitePatterns EF-hand calcium-binding domain. 525 537 IPR018247 -
Acco02g1273 676 MobiDBLite consensus disorder prediction 65 145 - -
Acco02g1273 676 MobiDBLite consensus disorder prediction 123 140 - -
Acco02g1273 676 FunFam Calcium-dependent protein kinase 1 213 296 - -
Acco02g1273 676 ProSiteProfiles EF-hand calcium-binding domain profile. 584 619 IPR002048 GO:0005509
Acco02g1273 676 SUPERFAMILY EF-hand 508 649 IPR011992 -
Acco02g1273 676 ProSitePatterns EF-hand calcium-binding domain. 561 573 IPR018247 -
Acco02g1273 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Acco02g1273 676 ProSiteProfiles Protein kinase domain profile. 211 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1273 676 SMART efh_1 552 580 IPR002048 GO:0005509
Acco02g1273 676 SMART efh_1 622 650 IPR002048 GO:0005509
Acco02g1273 676 SMART efh_1 516 544 IPR002048 GO:0005509
Acco02g1273 676 SMART efh_1 588 616 IPR002048 GO:0005509
Acco02g1273 676 CDD STKc_CAMK 210 468 - -
Acco02g1273 676 PANTHER SERINE/THREONINE-PROTEIN KINASE 201 643 - -
Acco02g1273 676 FunFam Calcium-dependent protein kinase 1 477 651 - -
Acco02g1273 676 Gene3D Transferase(Phosphotransferase) domain 1 297 493 - -
Acco02g1273 676 ProSiteProfiles EF-hand calcium-binding domain profile. 548 583 IPR002048 GO:0005509
Acco02g1273 676 FunFam Calcium-dependent protein kinase SK5 297 481 - -
Acco02g1273 676 SMART serkin_6 211 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1273 676 ProSitePatterns EF-hand calcium-binding domain. 597 609 IPR018247 -
Acco02g1273 676 Pfam Protein kinase domain 211 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1273 676 SUPERFAMILY Protein kinase-like (PK-like) 210 470 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1273 Acco-ChrAcco02 9458005 9462576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1273 39 651 EF-hand Containing Proteins AT3G10660 65.660 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco02g1273 Pkinase 5.8e-74 CL0016