Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1270 ATGGAGGTTCCGGACATTGAAGTCAAGGACAAGGGAAATATGACATCAGTTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGATGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAGCCAATCCTTCAACGGTTACTTCTTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAGTCTATTAGTTTCAAGGATTTAACCAGTCAAGAATTGTTTGAGGCTGTGGTTCAAGAAAGGGATTTGAGAGCTACTTCCTCAAGAAATGCAACTATTTCCCAACATCTGACTTTTGGTGATTTTGACCTGCAGCATTTATTATCCATGGGAGTAAGCGAAGCAGATATTGAAGAGAGGATAATTCAACATTTAGCTGCTGCCACAGTCATGGGAAGAGCGCACCATCTTGGTCGTAGAGAAGGAAATAGGACTAGGTCATATCGTCATGGTCGTCCTCCCTTCATAATGTTCTCAACTCCTCCGCCTGGTGCTGTTTCAGCTGCTGGAGGGGGTACCGAACCAACCGCAATTCCTGTAGGAAATCCATCTAGCCCACTTAATTCTGAAGGAGATGAACCATCACAGCAGATCCCAAGCCTTCATACACAAAGTTCTTTAGCTTCTGGATCTACTGTCAGGGCAACAAATCGTCAAGGAGTTCTTTATAATGATCGAAGCTCTACTGTCCAATCTGCACCACTTGCCCAGGGCAGAGCAGGGCCATCAGAACTTAAGTCATTTTCCGAGTCTCTGAGATCCAGACTTGGTTCAGTGTCTATGAGATACAAAGAGACTATTTCAAAAGGCGCGAGGCTATGGGGGGAAAGGCTGTTCTCTCATGGTACTTCCATGTCTGATATTGGTTCAGAAGTTAGGAGAGAGTTTAATGCTGGAATCGCTAGTGTATCCCGATTGATGGAGCGCCTTGAAACAAGAGAAAATAACGATGGAGCAGGGGATAGTTCTTTGTCAAATCATTTGGCTGCAGAGACAAGCAACCCAAACAATGGTGAAGCTCATGAGGTTAACACTCAGCATGACAACACTCCAGCCGCTTGTTCTGCGGACCCACATTCAGACTGA 1128 0.4566 MEVPDIEVKDKGNMTSVAAFVEGGIQEACDDSCSICLEDFSEANPSTVTSCKHDFHLQCILEWCQRSSQCPMCWQSISFKDLTSQELFEAVVQERDLRATSSRNATISQHLTFGDFDLQHLLSMGVSEADIEERIIQHLAAATVMGRAHHLGRREGNRTRSYRHGRPPFIMFSTPPPGAVSAAGGGTEPTAIPVGNPSSPLNSEGDEPSQQIPSLHTQSSLASGSTVRATNRQGVLYNDRSSTVQSAPLAQGRAGPSELKSFSESLRSRLGSVSMRYKETISKGARLWGERLFSHGTSMSDIGSEVRREFNAGIASVSRLMERLETRENNDGAGDSSLSNHLAAETSNPNNGEAHEVNTQHDNTPAACSADPHSD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1270 375 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Acco02g1270 375 MobiDBLite consensus disorder prediction 192 250 - -
Acco02g1270 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 116 IPR013083 -
Acco02g1270 375 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 26 81 - -
Acco02g1270 375 MobiDBLite consensus disorder prediction 151 260 - -
Acco02g1270 375 Pfam Ring finger domain 31 73 IPR001841 -
Acco02g1270 375 MobiDBLite consensus disorder prediction 331 375 - -
Acco02g1270 375 MobiDBLite consensus disorder prediction 328 375 - -
Acco02g1270 375 SMART ring_2 33 73 IPR001841 -
Acco02g1270 375 SUPERFAMILY RING/U-box 24 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1270 Acco-ChrAcco02 9448422 9451520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1270 30 81 C3H Transcription Factor Family AT4G00335 48.077 6.01e-14 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1270 02 9448422 9451520 Acco02g1270 02 9448422 9451520 ECH