Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1228 ATGAATGATGAAGAGTGTGGGGTTGTGACTTGTGAGGGCTTTCACTCTGAGACATGGAGTCCTCCCAGTTGTCCATTTGATCTGAGTACTCCTCTGCTCTGCTTCTCTCTGGGTCCCACCCCTTCCCTCCCTATTACTCCTCTCTCTCCGATCCCTCCTTCGTCCACCACCACCACCACCTCTCACTCTCTCTCTCTCATGGACAAGTCCGACAGAGAGACTCATGACTTCATGAACGTTGAGTCCTTCTCTCAGCTCCCTTTTATCCGTCCTCCTCCTCTCAAAGACAAGCCCCTTAAGCTTTTCGGTATTGAATTCCCCAACGCCGAATCTTCTTCTTCTGCCCCCGACGACGCCCACTCCTCCGACGCCAACAATAATAATGCTTTTGACCTCGATTCCAAGGACGCCGCTTCCGCCTCCGCCGACAATAACGCTGAAACCAGCCGCCGATTCGAATGCCATTACTGTTGTAGAAACTTCCCCACCTCTCAAGCCTTAGGTGGCCACCAAAACGCCCATAAACGTGAGCGTCAGCACGCCAAGCGAGCTCACCTTCAGTCCGCCATGGTCTACAATAGCCTCTCCGCCGACGCCGACGCCGCTCATGTCTACGGCCTCATGAACTACCACCGCATAGGTTCCACCACTCCATACCCCTCCTGGCATAATAGTAACTCTGCCGGTGGAAGGTTTTATGGAAGCCATGGTACGACGCCGTATCCTCATCTGCAACCCATCAACGGTAGCCCCTTAGCCTTGTGCCGGATCCCCGCCACCGTCCAAAACAACCCTACTACCACTTTCAATCGTGACCGTTCGTTGCACTTACAACATCCGTTGCCCTTGCTCGCCGGCAACGAAATTAACGTCGGAGCTTCTCATCAGGTCGTTGGTTCCGCTTCGCAGAATCGCCTTGTTTATGACTCTACTAAACCCGGCGTTCACGACCATGTGAGTTTGGATCTTCACCTGTGA 978 0.5358 MNDEECGVVTCEGFHSETWSPPSCPFDLSTPLLCFSLGPTPSLPITPLSPIPPSSTTTTTSHSLSLMDKSDRETHDFMNVESFSQLPFIRPPPLKDKPLKLFGIEFPNAESSSSAPDDAHSSDANNNNAFDLDSKDAASASADNNAETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVYNSLSADADAAHVYGLMNYHRIGSTTPYPSWHNSNSAGGRFYGSHGTTPYPHLQPINGSPLALCRIPATVQNNPTTTFNRDRSLHLQHPLPLLAGNEINVGASHQVVGSASQNRLVYDSTKPGVHDHVSLDLHL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1228 325 PANTHER ZINC FINGER PROTEIN GIS 67 325 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Acco02g1228 325 SUPERFAMILY beta-beta-alpha zinc fingers 149 180 IPR036236 -
Acco02g1228 325 MobiDBLite consensus disorder prediction 110 132 - -
Acco02g1228 325 MobiDBLite consensus disorder prediction 45 65 - -
Acco02g1228 325 Gene3D Classic Zinc Finger 131 204 - -
Acco02g1228 325 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 179 IPR013087 -
Acco02g1228 325 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1228 Acco-ChrAcco02 9106804 9107781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1228 67 325 C2H2 Transcription Factor Family AT3G58070 41.912 2.76e-47 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1228 02 9106804 9107781 Acco06g1053 06 7112198 7112938 CCT
Acco02g1228 02 9106804 9107781 Acco02g1228 02 9106804 9107781 ECH