Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1223 ATGTTCTGTTGCGGAGGTACAGAGGAAGAGAGCAGTGGCCCACCTGCAAACCAAAACCATGCACTACCCAGAGGTGGTAATGCGTATGGAGAAGGGGGTGGCAGAGGAGAGCCAAGAAGCAATGCAGCCAAGGCTGGTGCTCCCCAAAAAGTGTTGCCAATTGAGACACCCGCGATACCATTGTACGAGTTAAATAGGTTAACGAACAACTTTGGCCAAAACGCTTTGATTGGAGAAGGTTCCTACGGACGAGTCTTTTATGCCAAGTTAAGCGACGGTCGGGATGCAGCCATCAAGAAGCTGGATACCGGTGGTAATTCTACCCCTGACGAAGACGCCGATTTTGCAGCTCAGTTATCTCTTGTTTCAAGACTGAAGCACGATCACTTTGTGTCGTTGATTGGATATTGTTTGGAGTCACGTAACAGAATTTTGGTTTATCAGCATGCAAGTTTGGGTTCTTTGCACGACGTATTACATGGAAGGAAAGGTGTACAGGGGGCGGCACCAGGTCCACCTCTGACCTGGAACCAGAGAGCAAAGATCGCACTTGGAGCAGCAAAAGGCCTTGAGTATCTTCATGAAAAGGTTCAACCTCCCATAGTCCATCGTGATATCAGATCCAGCAATGTCTTACTGTTCGGTGACTATGATGCCAAGATTGCGGATTTCAACTTGACCAACCAGGGTTGTGACACAGCAGCTCGCCTCCATTCAACTAGAGTCTTGGGAACATTTGGATATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGCGACGTTTACAGTTTCGGAGTAGTTCTCTTAGAACTCTTAACAGGAAGAAAACCAGTGGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTGGATCCCAAACTCAACAATGAGTACCCCCCAAAGGCAATTGCTAAGTTCGCGGCGGTTGCAGCATTGTGTGTTCAGTATGAGGCTGACTTCCGGCCCAACATGACCATTGTGGTGAAAGCTTTGCAGCCACTTCTGAATGCAAGACCAGCTGGCCCAGAACCTAGTGCTTAA 1101 0.4859 MFCCGGTEEESSGPPANQNHALPRGGNAYGEGGGRGEPRSNAAKAGAPQKVLPIETPAIPLYELNRLTNNFGQNALIGEGSYGRVFYAKLSDGRDAAIKKLDTGGNSTPDEDADFAAQLSLVSRLKHDHFVSLIGYCLESRNRILVYQHASLGSLHDVLHGRKGVQGAAPGPPLTWNQRAKIALGAAKGLEYLHEKVQPPIVHRDIRSSNVLLFGDYDAKIADFNLTNQGCDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKFAAVAALCVQYEADFRPNMTIVVKALQPLLNARPAGPEPSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1223 366 Gene3D Phosphorylase Kinase; domain 1 38 149 - -
Acco02g1223 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 359 - -
Acco02g1223 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Acco02g1223 366 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Acco02g1223 366 FunFam PTI1-like tyrosine-protein kinase 3 151 360 - -
Acco02g1223 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Acco02g1223 366 Pfam Protein tyrosine and serine/threonine kinase 75 351 IPR001245 GO:0004672|GO:0006468
Acco02g1223 366 MobiDBLite consensus disorder prediction 1 49 - -
Acco02g1223 366 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1223 366 PIRSF ILK 34 358 - -
Acco02g1223 366 Gene3D Transferase(Phosphotransferase) domain 1 151 360 - -
Acco02g1223 366 SMART tyrkin_6 71 351 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1223 Acco-ChrAcco02 9017713 9019521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1223 35 365 Receptor kinase-like Gene Family AT3G58690 43.881 1.85e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Acco02g1223 PK_Tyr_Ser-Thr 5.7e-43 CL0016