Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1212 ATGTTGAAGCCTCAACTGTTAGCAATCATCTTCATCAGAATCCTCCTCCGCCACATCCAAGTAGTCGACTGCTTTACTTTCGATTTCTCCCTCTTCAAGCCAGAAGATCAGAATCGCCTAATACTGAGTGATTTTTCGCGCATATTCCGAGATGCCATCCAAGTGACACCCGATGCTTACGGTGAAGACCTGAGGAACAAGTCCGGGAGGGCCTTCTACAATAAGGCATACAGGGTTTGGAGCAAGAAGAAGAACCAAACGGTGTCGTTTAATACTTCCTTCATCTTCAATATCAGCCCCAATACTCCTTCAAACACCGGTGCCGGCGAAGGATTGGCCTTCATACTAGCCGCGGACACAAGTCTCCCTCCCAACAGTTATGGAAGATGGCTTGGCATTGTGAATTCCTCCACAAATGGCACTTCTGTTGCAGCCATATTGGCTGTGGAGTTTGATACCAGAAACAACTCTCCAGATGATGACCCCAACGGTCATGTTGGCGTGAACGTGAACAGTATTTTCTCCATCAAACAGGCACCATTACTTCCCTTGGGGATCAATATTTCATCGGGCGTCAATGTGTCGGTGAGAATTCAGTATGATAACGATGTGATCTCTGTCTTCGGGTACATGATGAATGGAACCAAATCACAAGAGGACCTCTTGTTGCAATCTCCACCCCTGAATCTCACCTCATATCTCCCAGAGAAGGTATACCTGGGGTTCTCTGCATCCACGAGCAATTTCAATGAGTTGAACTGCATTAAATCTTGGGAGTTCAACGGTGAAGATATCGGAGATGGAAATCAAGACCTACTGTGGGTTTGGATCACAGTTCCGACGGTAATGGTTATTATCGCCGGTGCGGCGACATTTTTCTTGATATGGCGGTGGAGAAGAAGAGGGGAAATAACAGAGGATGCGTATCCGAGGATAGAAGACCAGATCAAGTGTTCCTCAATGGCTCCGAAGAAATTCCGGCTGAGGGAAATCAAAAGAGCGACGGCCAATTTCAACGACCAAAACAAACTCGGGGAAGGTGGTTTCGGAAAGGTGTACAAGGGAATGCTGGGAAACAGAGAGATCGCAGTGAAGAGAGTGTCCAAGGATTCACGTCAAGGGAAGCAAGAATTCATAGCAGAAGTCACGACAATAGGTAGCCTTCACCACAAGAATCTGGTTAAACTCATAGGTTGGTGCTACGAGAGAAATGAACTCCTCCTCATCTACGAGTTCATGCCCAATAAAAGCCTAGACAAGTACCTATTCGAGAACTCAGATGGATCACCATATCAAAACCTTCACTGGGAAACCAGATACAATGTGATACAGGGTGTGGCAGAGGCCCTGGACTATCTTCACAACGGGTGCGACAAGAGGGTGATTCACAGGGACATCAAGGCAAGCAATATCATGTTGGACTCAGACTTCAACGCCAAGCTGGGAGATTTCGGACTTGCTCGAACCATCCAGAAAAGAAACGAAACACACCATTCCACCAAAGGAATAGCAGGAACTCCGGGTTACATGGCGCCGGAGACGTTTCTGACGGGGAGGGCGACGGTGGAAACCGACGTGTACGCGTTTGGGGTTATGATAATGGAAGTGGTGTGTGGGAAGAGGCCAGGGAACGTGGCTGTTGAGGACGAATACAAGAACAGTGTGGTGTTTTGGGTGTGGGAGAATTATGGGAATGGAAAAACTTTAGATGGAGTTGATAAAAGAATAAAGAAGGAGATTGAGGGAGACGAGGAGCGAGTGGAGAGAGTGATCGTGCTAGGCCTTGCCTGTTGCCATCCCAATCCTCACAAAAGACCATCCATGAAGACGGTATTACAGGTTCTGACCGGCGAGGTGGCTCCGCCGGATGTCCCAAGGGAACGGCCGGCTTTTGTGTGGCCGGCCGCCCCCGCTTCCTTCAACTTCAATGATAGATCCGTCACTTCAGCCCAACTCACTCCTCCCTTCACTCAGCTCACCGGCAGATGA 1989 0.4857 MLKPQLLAIIFIRILLRHIQVVDCFTFDFSLFKPEDQNRLILSDFSRIFRDAIQVTPDAYGEDLRNKSGRAFYNKAYRVWSKKKNQTVSFNTSFIFNISPNTPSNTGAGEGLAFILAADTSLPPNSYGRWLGIVNSSTNGTSVAAILAVEFDTRNNSPDDDPNGHVGVNVNSIFSIKQAPLLPLGINISSGVNVSVRIQYDNDVISVFGYMMNGTKSQEDLLLQSPPLNLTSYLPEKVYLGFSASTSNFNELNCIKSWEFNGEDIGDGNQDLLWVWITVPTVMVIIAGAATFFLIWRWRRRGEITEDAYPRIEDQIKCSSMAPKKFRLREIKRATANFNDQNKLGEGGFGKVYKGMLGNREIAVKRVSKDSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYERNELLLIYEFMPNKSLDKYLFENSDGSPYQNLHWETRYNVIQGVAEALDYLHNGCDKRVIHRDIKASNIMLDSDFNAKLGDFGLARTIQKRNETHHSTKGIAGTPGYMAPETFLTGRATVETDVYAFGVMIMEVVCGKRPGNVAVEDEYKNSVVFWVWENYGNGKTLDGVDKRIKKEIEGDEERVERVIVLGLACCHPNPHKRPSMKTVLQVLTGEVAPPDVPRERPAFVWPAAPASFNFNDRSVTSAQLTPPFTQLTGR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1212 662 PANTHER - 57 622 - -
Acco02g1212 662 FunFam Probable L-type lectin-domain containing receptor kinase S.5 24 269 - -
Acco02g1212 662 CDD lectin_legume_LecRK_Arcelin_ConA 25 261 IPR001220 GO:0030246
Acco02g1212 662 SUPERFAMILY Protein kinase-like (PK-like) 320 615 IPR011009 -
Acco02g1212 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Acco02g1212 662 CDD STKc_IRAK 344 617 - -
Acco02g1212 662 ProSiteProfiles Protein kinase domain profile. 338 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1212 662 Gene3D Transferase(Phosphotransferase) domain 1 413 633 - -
Acco02g1212 662 FunFam Probable L-type lectin-domain containing receptor kinase S.5 323 412 - -
Acco02g1212 662 FunFam probable L-type lectin-domain containing receptor kinase S.5 413 621 - -
Acco02g1212 662 Pfam Protein kinase domain 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1212 662 Pfam Legume lectin domain 26 264 IPR001220 GO:0030246
Acco02g1212 662 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Acco02g1212 662 Gene3D - 22 268 - -
Acco02g1212 662 SMART serkin_6 338 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1212 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Acco02g1212 662 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Acco02g1212 662 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Acco02g1212 662 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1212 Acco-ChrAcco02 8902152 8904140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1212 68 631 Receptor kinase-like Gene Family AT5G55830 37.851 5.85e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco02g1212 Pkinase 1e-50 CL0016