Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1197 ATGGTTGATTGTTCAGTGCGGGTTCAAGTTCAGCATAGCCACGGCCTAAACGGGGATTCTAGTTCTGAATTTGGTAATAGTTATTGCGAATACATGGATATCAATCAGACCTGGAATATGGGAAGTTGCAGCCAAACACTGGCCGTCGCAGGAGGAGGGGGAGGGGGAGGGGCCCACCAACAACCACCACCACCAAACCAAGGCCCTGCAAAATCCTCGGCCACCATCATGAGCCGTTTTGAATCTCCAGCTTCTGCTTTCTACGCCACAGAACGATGCATGGGGTTTCAGGTTCAACAATATGATTCTCAGCTTGGTACTAATCCTTCTTTGACCTCTCAGTTTTCCAAGATGAACGACTTGGATTTCCCTCTTTATCAATCTGACCCCAGCTTTGAATTCTCCAATACCCTCCAAGCAATGGTGAAATCTCCATTGAGTAGCAGTAACCAATACAGTAGATTCCCAGAAAAATCCAATAAGTTTTCTTATGGGAATTTGCCCACCACCAAGTTTCTTCCTATTCAACAACACAGCTTGTTTATTAACGATGTTGCCTCAGTTAAGAGAAATCAAGATCATACGGCAAGTGCATGTAATTTACATGTTGATCAGATGAGTTTCTCTTCTTCTCAGCAAGAGAAGCTGACTCCACCAGTTACATCAGAAGGGAGTATGTCAGCTGTTTCTGGCAACCAGGGTTCCAATGGGACAGCAGCGACTTCATCAAGCAAAACACGTATTAGGTGGAACCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAAAAGGCGACGCCAAAAGCTATATTGAAGCTGATGGACTCCGATGGACTGACCATCTTCCATGTGAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGACTCAGCTCAAGGAAAGTCTGATAAAATACCCAATGTAGAAGATGTGCATCATCTTGACCCCAAAACTGGGTTGCAGCTAAGAGAGGCACTTCAGCTGCAGTTAGATGTTCAAAGGCGCCTTCATGAACAGCTAGAGATTCAGAGGAAGTTGCAGTTGAGAATTGAGGAACAGGGGAGGCAGCTGAAGATGATGTTTGATCAGCAGCAAAAGACTAGTAGTGATAGCCTCTTGGATACATAG 1155 0.4485 MVDCSVRVQVQHSHGLNGDSSSEFGNSYCEYMDINQTWNMGSCSQTLAVAGGGGGGGAHQQPPPPNQGPAKSSATIMSRFESPASAFYATERCMGFQVQQYDSQLGTNPSLTSQFSKMNDLDFPLYQSDPSFEFSNTLQAMVKSPLSSSNQYSRFPEKSNKFSYGNLPTTKFLPIQQHSLFINDVASVKRNQDHTASACNLHVDQMSFSSSQQEKLTPPVTSEGSMSAVSGNQGSNGTAATSSSKTRIRWNQDLHEKFVECVNRLGGAEKATPKAILKLMDSDGLTIFHVKSHLQKYRIAKYMPDSAQGKSDKIPNVEDVHHLDPKTGLQLREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGRQLKMMFDQQQKTSSDSLLDT 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1197 384 Coils Coil 332 352 - -
Acco02g1197 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 245 300 IPR006447 GO:0003677
Acco02g1197 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 223 379 IPR044848 GO:0003700
Acco02g1197 384 MobiDBLite consensus disorder prediction 210 246 - -
Acco02g1197 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 242 302 IPR017930 -
Acco02g1197 384 FunFam Myb family transcription factor 244 302 - -
Acco02g1197 384 Pfam MYB-CC type transfactor, LHEQLE motif 330 376 IPR025756 -
Acco02g1197 384 Pfam Myb-like DNA-binding domain 249 298 IPR001005 -
Acco02g1197 384 MobiDBLite consensus disorder prediction 51 73 - -
Acco02g1197 384 Gene3D - 244 303 - -
Acco02g1197 384 SUPERFAMILY Homeodomain-like 243 299 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1197 Acco-ChrAcco02 8778754 8780510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1197 239 375 G2-like Transcription Factor Family AT3G04450 56.738 2.77e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco02g1197 Myb_DNA-binding 1.8e-05 CL0123