Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1194 ATGGGTTCATCCTCCTTGAAATTTGGCCAGCATATCTACTTTGAGGATGTGACTGTCGGAGCTCAGCCCAAATCCACCGCTGTTCGCCGCTCCTCTTCATCTGCAACGGGAATGAAGAAGGGAAAGGGTGGTACTGTTCAAGGAGCTCAGCCTCCAAGGTGTCAGGTTGAGGGCTGCAAGGTTGATCTGAGTGACGCCAAGGCTTACTATTCCAGGCATAAAGTCTGTGGCTTTCACTCTAAATCCCCTAAAGTCATTGTTGCTGGTCTTGAACAGAGGTTTTGCCAACAATGCAGCAGATTTCATCAGCTTACTGAATTTGATCAAGTAAAACGAAGTTGCCGTAGGCGACTTGCAGGCCACAATGAACGTAGGCGAAAGCCCCAGCCTAGCTCCCTGTTGATCTCCCCCTATGCCAGATTTTCACCAGCTGTATTTGATAACCCGGGCAGAGTTGGTGGCTTTCTGATGGAATTTGCTGCAGACCATATGCCAACTCTGAGGAATGAGTTGCCAGCAGCAGCATCAATGGAGCAAGTTGCAGGCTATCAAAGTTGGGTGGGCAAGATAAACAGCTTTGGTCCCGAAAATCCTCCCGGGGGATGCTTCGCTGGAATTGCAGACACAAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGCCTAAGAAACACACCGCCAACTCTTGGAGTGAACAACTTATGCTTTGGAGGGACATCCATCACACAAGTTGCTACATCCTCTCATGGTGATCCCATTCCCATCCATCACCTTTCAAATGCCTCGGGGTCTTTCAAAGGCGTTGGACGAAATGTTTGTTTGCATGATGAGGTTCCTGATCTTGGTGCGGCTCAGATTTCACTCTCTAATTGTGAACTTCCCGGTGAACTTGTGATGTCACAATCCGGCCGGAGGCAATATATTGATCCGCAATCTGAGGCCTATGAGTCTTCTCAGCTGATGCACTGGTCACTTTGA 981 0.4893 MGSSSLKFGQHIYFEDVTVGAQPKSTAVRRSSSSATGMKKGKGGTVQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCGFHSKSPKVIVAGLEQRFCQQCSRFHQLTEFDQVKRSCRRRLAGHNERRRKPQPSSLLISPYARFSPAVFDNPGRVGGFLMEFAADHMPTLRNELPAAASMEQVAGYQSWVGKINSFGPENPPGGCFAGIADTSCALSLLSNQTWGLRNTPPTLGVNNLCFGGTSITQVATSSHGDPIPIHHLSNASGSFKGVGRNVCLHDEVPDLGAAQISLSNCELPGELVMSQSGRRQYIDPQSEAYESSQLMHWSL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1194 326 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 25 248 IPR044817 GO:0003677
Acco02g1194 326 Pfam SBP domain 54 127 IPR004333 GO:0003677
Acco02g1194 326 Gene3D - 44 115 IPR036893 GO:0003677|GO:0005634
Acco02g1194 326 ProSiteProfiles Zinc finger SBP-type profile. 51 128 IPR004333 GO:0003677
Acco02g1194 326 FunFam Squamosa promoter-binding-like protein 14 45 115 - -
Acco02g1194 326 SUPERFAMILY SBT domain 52 133 IPR036893 GO:0003677|GO:0005634
Acco02g1194 326 MobiDBLite consensus disorder prediction 24 40 - -
Acco02g1194 326 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1194 Acco-ChrAcco02 8754962 8757161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1194 6 326 SBP-box Gene Family AT3G57920 38.398 7.29e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco02g1194 SBP 6.4e-32 No_clan