Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1193 ATGGCATTCTTTCCAGGAAAGAAACGAGTATACTTCACAAAGACTCTAATTATCGAGACAATGGTTCGCAATTGCCTCTATATGCATCTCATTTTTATTGTCTTCTCGGCAATTTTGACTTCTCGGGATTCGGCAATTACTGATCCGGCTAATGTCGCACCTCTGCGAGATCCATACGAGACGTTGAACCGGTCGCCGGAGTTGAAGAACTGGAATCTTGAAGATCCCTGATTGAATCTCACGGGACATCTTGGAAGCCAACTCCATAATCTACAAAAATTGAAGATGCTTAATGTCACCTCCAATAACATAGGTGGGGAAATACCGTCCAGCTTACCCCCGAATGCCACACATATAAATATGGCTTGCAACTATTTGAGTCAAAATATTCCTCACGCATTACCTATGCTGACAAGACTGCGACATTTGAATCTGAGCTACAATTTGCTATCTGGACCCATTGGCAATGTTTTTACAGGCCTGGATAATCTCATAGAGATGTTCTTGCAAAATAATAACTTCACTGGATCAGTCGCATATCTAGCTGACCTCCCCATTACAGATTTGAATATTCAAGGTAATCTATTTAGTGGCATTCTTCCGTGGCATTTTCAGTTCATACCAAATCTATGGATCGGAGGTAATAAATTCCATGCAGAAGGCAATTCTCCTCCATGGGATTTTCCTTTAGACAAAGTACTAATTTTATACAACATTAGTTGCCCGCCCATGACTCAGGCAAACACCATCGAAAACCATTCCTCTCACAAAGTAAGTGCGCACAAGAAGAAACTTGTGAGTGCCGGAGAAGTAGCTTTTATGGTTGGTGGGGGAACGCTATTAGTTACAAGCATGGCGATCTTCATTGCAATCCGTACGAAAAGATTGAATAAAAAGGAGTTCAAAAGCTTCCAAAGCAGCCATGGCTCATTGCAATCGGATGCATATATTTTAAACATAGAAAACTATCCTATCCCGCCAAAAGAAAGCCCAACAATCCCGCCATTTAATTCTGCATCGCTGTTGGCTCCAAGGCGATTGCCTTCCCTGCGCCAATACAGAGCAGAGAACATGCCAAGAAGAAGTTATTCCACAACACGCAGATTCTCCGGAAGGGTAAAAGTTTACTCCGTGGGAGACCTTCAGGTGGCTACAGACAGCTTCAGTGAAGACAATTTTCTGGGAGAAGGATCTATGGGTTCTGCTTACAGAGCTGTGTTTCCAAATGGCCAAACTTTGGCTGTGAAGAATATCAACATGACGGGCCTGTCTTTACCCGAAGAGGAAACGTTTTTGGATGCCGTTTCCATCGCTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAATGGCTATTGTATGGAGCACGGTCAGCGTCTTCTTGTTTACGATTATGTTAGAAACTTAACTCTGCACGATGCTCTTCACAGTGGCGCATTCACGCCTTTATCTTGGGCCCTCCGTCTCCGTATTGCCCTTGGTGTTGCTCAGGCTCTGGATTATTTGCACTCGACGTTCTCCCCTCCTGTTGCACACGGCAAATTGAACGCTGCCAATATCCTTCTCGACGAAAACATGATGCCTCGTGTCTGTGACTGTGGCCTATCTATTTTGAGACCGCTAATGAGCTACATAGTCAAAGGTTCTGGACTTGCAGCAGAAGACGCAGGCTACATTGCACCGGACCACGGCCAACCAGGAATTAGCAACCCAAAGAATGACGCGGAAAAATACCTGGGAAGATGGGCATCATCGAGGCTTCATGACAATGAGAGCTTGGAACAGATGGTGGATCCAGGAATTAAAGGAAGTGTTTCAGCCAAAGCCCTCTCTCGTTATGCTGATATCGTCTCGCTCTGCATACAGCCCGTGAAGGAATTTCGACCAATAATGTCGACGGTGGTTGACTCTCTTAAAATCTGTTCACAAAAGCTTACCATGGACAAACCCACCGCCACCACCGATTCTGTATGTACAAACTCATTGCATAGCTTAAGCATGATCATCCTCATAATTAGAACCAAGTTTCTGGACGATTTACATCTGCGTGTTCCAACTGTGCAAAATGCCACTGCACCTAAGCCTATCTTCATAAAAGTTCTATGCCACAAGTATTTCTGCTTTGTTTTTCCTTTCAATATTTAG 2145 0.4438 MAFFPGKKRVYFTKTLIIETMVRNCLYMHLIFIVFSAILTSRDSAITDPANVAPLRDPYETLNRSPELKNWNLEDPXLNLTGHLGSQLHNLQKLKMLNVTSNNIGGEIPSSLPPNATHINMACNYLSQNIPHALPMLTRLRHLNLSYNLLSGPIGNVFTGLDNLIEMFLQNNNFTGSVAYLADLPITDLNIQGNLFSGILPWHFQFIPNLWIGGNKFHAEGNSPPWDFPLDKVLILYNISCPPMTQANTIENHSSHKVSAHKKKLVSAGEVAFMVGGGTLLVTSMAIFIAIRTKRLNKKEFKSFQSSHGSLQSDAYILNIENYPIPPKESPTIPPFNSASLLAPRRLPSLRQYRAENMPRRSYSTTRRFSGRVKVYSVGDLQVATDSFSEDNFLGEGSMGSAYRAVFPNGQTLAVKNINMTGLSLPEEETFLDAVSIASRLRHPNIVALNGYCMEHGQRLLVYDYVRNLTLHDALHSGAFTPLSWALRLRIALGVAQALDYLHSTFSPPVAHGKLNAANILLDENMMPRVCDCGLSILRPLMSYIVKGSGLAAEDAGYIAPDHGQPGISNPKNDAEKYLGRWASSRLHDNESLEQMVDPGIKGSVSAKALSRYADIVSLCIQPVKEFRPIMSTVVDSLKICSQKLTMDKPTATTDSVCTNSLHSLSMIILIIRTKFLDDLHLRVPTVQNATAPKPIFIKVLCHKYFCFVFPFNI 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1193 714 SUPERFAMILY Protein kinase-like (PK-like) 363 646 IPR011009 -
Acco02g1193 714 Pfam Protein tyrosine and serine/threonine kinase 392 540 IPR001245 GO:0004672|GO:0006468
Acco02g1193 714 Gene3D Ribonuclease Inhibitor 43 259 IPR032675 -
Acco02g1193 714 Gene3D Transferase(Phosphotransferase) domain 1 468 654 - -
Acco02g1193 714 Gene3D Phosphorylase Kinase; domain 1 350 465 - -
Acco02g1193 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 73 639 IPR046959 -
Acco02g1193 714 ProSiteProfiles Protein kinase domain profile. 388 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1193 714 SUPERFAMILY L domain-like 68 212 - -
Acco02g1193 714 ProSitePatterns Protein kinases ATP-binding region signature. 394 416 IPR017441 GO:0005524
Acco02g1193 714 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 354 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1193 Acco-ChrAcco02 8746612 8751108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1193 30 655 Strubbelig Receptor Gene Family AT5G06820 43.972 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco02g1193 PK_Tyr_Ser-Thr 2.1e-21 CL0016