Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1188 ATGGCTTACAGTGGTAACAAGAGCAACAACGAAACAAGCAGTGCGATGGAACCACTCCCACTCCCACCACCTCCTCTGCTTCACCATCAAATTCATCAAGACCACCGAATCTCTTTTGGAATGATGCCATCTTCCTCCTCCTCCAATTTTCTAAGCAAGGATTCCGGAGCTTACGATTTAGGTGACTTGGATCAGGCGCTTCTTTTGTATCTCGACGGACAAGCCGACCCTTCCGCCATTAATGTTCAAGACCAAAGACAGAACTCGTCATCGTCGGGAATGAGGCCTCCCACTCTCAACATTTTCCCCTCCCAGCCTATGCACGTCGACCCGCCTTCCTCCAGCAAGGCTGGCATGGAATTAGTTTCTCCTCAAAGCAGTGGTTCCAAGAGACCATCGGAGCCGTCCATGAAGTTGTCTCACTCGCAAAACGAAGCAGCCGCCGCCGCCGCCCCTAATCAATCAGCCAAAGCTGTCAAGCGAGAGAGCACTCGTAAGGGCCCAACCTCAAGTTCTGAACAGGAGGGGCCTAAAACACCTGATCCTAAGACACTCAGAAGACTAGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTGCAGCAGCTAGAGTCAGGTAGGATCAGGCTGAATCAGCTGGAACAAGAATTGCAGCGTGCTAGAGCTCAAGGCATATTCTTTGGCGGATCGGGTGCAGTTTTGGGAGGAGAGCAAGGCCTCCCCGTCGCTATGAGTGCCATTAGCCCAGATGCTGCAATGTTCGACGTGGAATATGGGAGATGGGTGGAGGAGCACCACCGGCTAGTGTGTGAGCTGAGGGCGGCGGTTCAAGAGCACCTGCCGGAGAACGAGCTGAGGCTATTTGTGGACAACTGTCTAGCTCATTATGACCAAGTTATGAACCTCAAGAGCATAGTGGCTAAAACGGACGTCTTCCACCTTGTTTCCGGCATGTGGAAAACTCCCGCCGAGCGTTGCTTCATGTGGATGGGTGGATTCAGGCCCTCTGAACTCATTAAGATAATTCTAAATCAAATAGAGCCGCTGACGGAGCAACAAATACTTGGGATCTGTGGGTTGCAACAATCCACACAGGAGGCAGAAGATGCTCTCTCACAAGGGCTGGAAGCTCTGAATCAATCTCTCTCGGAAACCATAACGTCAGACTCATTGAGCTCTACACCTAATATGGCCAACTACATGGGACAAATGGCCCTGGCCATCAACAAGCTCTCCACCCTCGAAGGTTTCGTCCGACAGGCGGATAGTCTTCGGCACCAAACGATTCACCGTCTGCATCAGATGCTAACGACGCGTCAAGCGGCGAGGTGTTTGCTGGCCATGGCGGAGTACTCTTATCGTCTGAGAGCCCTCAGCTCTCTGTGGGTGGCTCGCCCCCGCCAGGATTAA 1428 0.521 MAYSGNKSNNETSSAMEPLPLPPPPLLHHQIHQDHRISFGMMPSSSSSNFLSKDSGAYDLGDLDQALLLYLDGQADPSAINVQDQRQNSSSSGMRPPTLNIFPSQPMHVDPPSSSKAGMELVSPQSSGSKRPSEPSMKLSHSQNEAAAAAAPNQSAKAVKRESTRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESGRIRLNQLEQELQRARAQGIFFGGSGAVLGGEQGLPVAMSAISPDAAMFDVEYGRWVEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSIVAKTDVFHLVSGMWKTPAERCFMWMGGFRPSELIKIILNQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSSTPNMANYMGQMALAINKLSTLEGFVRQADSLRHQTIHRLHQMLTTRQAARCLLAMAEYSYRLRALSSLWVARPRQD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1188 475 Pfam Seed dormancy control 275 349 IPR025422 GO:0006351|GO:0043565
Acco02g1188 475 CDD bZIP_HBP1b-like 183 235 - -
Acco02g1188 475 Pfam bZIP transcription factor 183 211 IPR004827 GO:0003700|GO:0006355
Acco02g1188 475 ProSiteProfiles DOG1 domain profile. 257 471 IPR025422 GO:0006351|GO:0043565
Acco02g1188 475 MobiDBLite consensus disorder prediction 83 186 - -
Acco02g1188 475 Coils Coil 202 229 - -
Acco02g1188 475 FunFam BZIP family transcription factor 182 231 - -
Acco02g1188 475 PANTHER TRANSCRIPTION FACTOR TGA9 99 474 - -
Acco02g1188 475 SMART brlzneu 179 253 IPR004827 GO:0003700|GO:0006355
Acco02g1188 475 MobiDBLite consensus disorder prediction 83 99 - -
Acco02g1188 475 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Acco02g1188 475 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Acco02g1188 475 SUPERFAMILY Leucine zipper domain 183 224 IPR046347 GO:0003700|GO:0006355
Acco02g1188 475 MobiDBLite consensus disorder prediction 1 16 - -
Acco02g1188 475 MobiDBLite consensus disorder prediction 118 150 - -
Acco02g1188 475 MobiDBLite consensus disorder prediction 1 28 - -
Acco02g1188 475 Gene3D - 182 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1188 Acco-ChrAcco02 8705914 8711846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1188 49 475 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.430 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco02g1188 DOG1 1.1e-31 No_clan