Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1176 ATGGAAATGCATCTTCCTCTCCACATAGCTTCCTTTCTCCTCTGCTTCTTAGCTTCCTGCACCTCCTCATTGAACTCCGATGGTCTCTCTCTACTCGCCCTCAAAGCCGCCGTTGAGTCTGACCCTTCCGGAGTTCTCAACTCGTGGTCTGACTCTGACTCCTCCCCGTGTCGCTGGGCTGGTGTCGCCTGTGCCCATGACCGAGTCACCCAGCTGGTTCTGTCCAACAAAGGCCTTACCGGTTACATCCCATCTGAGCTCGGTTTGCTCGACTCGCTTAGGAAACTCAGTCTTTCGCACAATAACTTCTCCAACGCCATTCCTTCCCGTCTGTTCAACGCGACCGGTCTCGTCGTTTTAGATCTCTCTCATAATCTCCTCTCTGGACCCATTCCAACTGAGATCAGGTTTCTCAAATCACTCAGACATTTGGACTTATCCTCAAATTCCCTCAATGGCTCTCTCCCTCAAGCTTTATCCGAGCTCACTAACCTCGTCGGAAACTTGAATCTATCTTACAATCACTTCATCGGTGGGATCCCGGAGTCTTTGGGCCGACTCCCTGTGATTGTCAGTTTGGATCTCCAGAACAACAATCTGACAGGCAAAATCCCTCTAGTAGGTTCGTTGCTAAACCAGGGTCCTACAGCTTTCTCCGGTAACCCCGGGCTCTGTGGGTTCCCTTTGCAGAATGCCTGCCCAGAAGCTCAGAATCCGGAGAATTACCCAAGCACCGAAGACCCTGAGAACCCAAAAACCGTTAACCCTGGCTTTCCAACGGGATTTCAAGAAGCGAAGGCGAAAGAGCGAGGTCGTTCCGTCATTGTCCCTATGATTTTCGGCGTTGCATTGGTAGCAGGGGCCATTTCGTTGTCAGTGTGGCTGTTGCGCAGACGACGGACGGTTGATTTGGGCCAGTTGGGAAAGCAAAAATTAGACAATGAGGCCGCCGAAGGAGGAGGTGAAGGGCAAAAGGGTAAATTCGTGATCGTAGATGAAGGGTTCAGTCTGGAACTTGAGGATTTGTTAAGGGCATCCGCATATGTGGTGGGGAAGAGCAAGAGTGGGATAGTATATAAGGTGCTGGCTGTAGAGAAAGGGTCGGGCACGGCGGCGACCGTGGTGGCCGTCCGGCGGTTGAGTGAGGGTGATGCCACGTGGAAGCTCAAGGAGTTCGAGGCTGAAGTGGAGACCATTGGGAGGGTCAACCACCCTAACATCGTCCGCTTAAGAGCATATTACTATGCAAGTGATGAAAAATTAATCATCACTGATTTCATCCGCAATGGAAGCTTGCACACTGCACTTCATGGTGGGCCTTCCAATCCTTTGCCGCCATTAACATGGGCAGCGAGGTTAAAGATTGCTCAAGGAGCTGCAAGGGGTTTAATGTACATACACGAGTTCAGTGGTCGAAAATACGTGCATGGCAACCTTAAATCAACAAAAATCTTGCTGGACGATGAACTCGATCCTTTCATATCTGGGTTTGGACTTGCTCGTCTCATGTCGAGTTGCTCTAAATCCATAACAATGGCACCAAAGCGACAGAATTCAAAGCAGTCAATTGCAACCTCTGCAATGGCAGCTTCCCAAAACAACCACTTGGCACCAGAGGTGCGCATGAGCGGAGGCAAATATACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTCTTGTTAGAACTACTAACAGGACGGAGGCCAGATTCAGGAGCAGATAATGAGGGTGAGGTACTGGAGAGTTTTGTGAGGCAAGCATTCAGGGAAGAGAAGCCCTTGTGCGAGATTATAGACCCGGCACTACTGTCTGAAGTGTATGCTAAAAAGCAGGTGGTAGCAGCATTTCATCTTGCACTCAACTGCACAGAACATGACGCAGAGTTGCGACCGAGAATAAGAACCGTGTCGGAGAGCCTTGATCGGATCAAGGCACCGTGA 1941 0.5013 MEMHLPLHIASFLLCFLASCTSSLNSDGLSLLALKAAVESDPSGVLNSWSDSDSSPCRWAGVACAHDRVTQLVLSNKGLTGYIPSELGLLDSLRKLSLSHNNFSNAIPSRLFNATGLVVLDLSHNLLSGPIPTEIRFLKSLRHLDLSSNSLNGSLPQALSELTNLVGNLNLSYNHFIGGIPESLGRLPVIVSLDLQNNNLTGKIPLVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPENYPSTEDPENPKTVNPGFPTGFQEAKAKERGRSVIVPMIFGVALVAGAISLSVWLLRRRRTVDLGQLGKQKLDNEAAEGGGEGQKGKFVIVDEGFSLELEDLLRASAYVVGKSKSGIVYKVLAVEKGSGTAATVVAVRRLSEGDATWKLKEFEAEVETIGRVNHPNIVRLRAYYYASDEKLIITDFIRNGSLHTALHGGPSNPLPPLTWAARLKIAQGAARGLMYIHEFSGRKYVHGNLKSTKILLDDELDPFISGFGLARLMSSCSKSITMAPKRQNSKQSIATSAMAASQNNHLAPEVRMSGGKYTQKCDVYSFGIVLLELLTGRRPDSGADNEGEVLESFVRQAFREEKPLCEIIDPALLSEVYAKKQVVAAFHLALNCTEHDAELRPRIRTVSESLDRIKAP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1176 646 SUPERFAMILY L domain-like 27 230 - -
Acco02g1176 646 Gene3D Transferase(Phosphotransferase) domain 1 427 646 - -
Acco02g1176 646 SUPERFAMILY Protein kinase-like (PK-like) 349 640 IPR011009 -
Acco02g1176 646 Gene3D Phosphorylase Kinase; domain 1 330 426 - -
Acco02g1176 646 Pfam Protein tyrosine and serine/threonine kinase 350 593 IPR001245 GO:0004672|GO:0006468
Acco02g1176 646 SMART LRR_typ_2 138 162 IPR003591 -
Acco02g1176 646 SMART LRR_typ_2 90 114 IPR003591 -
Acco02g1176 646 Gene3D Ribonuclease Inhibitor 168 235 IPR032675 -
Acco02g1176 646 Gene3D Ribonuclease Inhibitor 24 167 IPR032675 -
Acco02g1176 646 ProSiteProfiles Protein kinase domain profile. 344 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1176 646 PRINTS Leucine-rich repeat signature 117 130 - -
Acco02g1176 646 PRINTS Leucine-rich repeat signature 138 151 - -
Acco02g1176 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 644 IPR046959 -
Acco02g1176 646 FunFam Leucine-rich repeat receptor-like kinase 29 140 - -
Acco02g1176 646 FunFam Leucine-rich repeat receptor-like protein kinase 141 235 - -
Acco02g1176 646 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Acco02g1176 646 MobiDBLite consensus disorder prediction 235 251 - -
Acco02g1176 646 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Acco02g1176 646 MobiDBLite consensus disorder prediction 235 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1176 Acco-ChrAcco02 8642634 8645523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1176 24 645 Receptor kinase-like Gene Family AT3G57830 61.526 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco02g1176 PK_Tyr_Ser-Thr 3.9e-29 CL0016