Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1167 ATGGCGAAGAAGGAGAAGACTAGGGTTTCTGATGACGAAAGTCTTGAGTCCGAACAAGAAGCGGAGAAACATGATCAAAGCCCAAGTTCCTCTACGGAAAAGAGCCTCTACGAGGTTCTTGGAGTGGAGAGAACTGCATCTCAACAGGAAATAAAGAAAGCATATTACAAGTTAGCATTGCGTCTCCATCCTGATAAAAACCCCGGCGATGAGGAAGCTAAGGAGAAGTTTCAGCAATTGCAAAAAGTGATCTCAATTCTCGGTGATGAAGAGAAACGGGCTCTTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCAGGGGAAGTTGTTCAGAATCTTCATGAGTATTTCAGAGCTGTGTACAAGAAGGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGAGGATCAGACTCTGAGAGAAATGATTTAATTGATCTGTACAAAAAGTACAAGGGTGATATGAACAGGCTCTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACATCGTTTCAAAGATATTCTTGATGAGGTTATAGCTGCTGGCGAACTGAAGTCGACTAAAGCCTACCAGAAATGGGCAAAGAAAGTTGATGAAATGAAGCCACCAACCAGTCCTTTAAAGAGAGCAAAGTCAAACAAACAGGCCGGAACAGATCTATATGCAATCATATCACAACGCCGAAATGAGAGGAAAGGCCAATTTGATTCAATGTTCTCATCATTAATTTCTAAATATGGAGGGGGTGATGCAGCAGAGCCCAGTGAAGAAGAGTTTGAAGCCACACAGAGAAAACTTGAAAGCCGAAGGGTGTCTAAAAAATCAAAACGCAAGTAA 858 0.4161 MAKKEKTRVSDDESLESEQEAEKHDQSPSSSTEKSLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGEVVQNLHEYFRAVYKKVTEADIEEFEANYRGSDSERNDLIDLYKKYKGDMNRLFCSMLCSDPKLDSHRFKDILDEVIAAGELKSTKAYQKWAKKVDEMKPPTSPLKRAKSNKQAGTDLYAIISQRRNERKGQFDSMFSSLISKYGGGDAAEPSEEEFEATQRKLESRRVSKKSKRK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1167 285 SMART dnaj_3 34 92 IPR001623 -
Acco02g1167 285 Gene3D DnaJ domain 18 114 IPR036869 -
Acco02g1167 285 MobiDBLite consensus disorder prediction 1 36 - -
Acco02g1167 285 SUPERFAMILY Chaperone J-domain 32 111 IPR036869 -
Acco02g1167 285 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Acco02g1167 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 285 IPR042977 -
Acco02g1167 285 CDD DnaJ 37 89 IPR001623 -
Acco02g1167 285 Pfam DnaJ domain 36 97 IPR001623 -
Acco02g1167 285 MobiDBLite consensus disorder prediction 1 29 - -
Acco02g1167 285 MobiDBLite consensus disorder prediction 253 285 - -
Acco02g1167 285 PRINTS DnaJ domain signature 37 55 IPR001623 -
Acco02g1167 285 PRINTS DnaJ domain signature 92 111 IPR001623 -
Acco02g1167 285 PRINTS DnaJ domain signature 72 92 IPR001623 -
Acco02g1167 285 PRINTS DnaJ domain signature 55 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1167 Acco-ChrAcco02 8545590 8548671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1167 27 97 C2H2 Transcription Factor Family AT1G74250 39.474 5.62e-09 55.1