Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1152 ATGAGAGTCAGCTCCCCTCTGCCGTTGATTTGTTCAGATCTTTCTCTGAAACTAAAAAATGATATGCTTGAACTGGGGTCGGGTCAGATTAGATCGCCATTGTTGTTGTGCTTCTTCATTGGCTTCTTGCTACACTCAGCTTTCACTTCTGAAATTCCATTGGGTTCAAAACTTTCTGTGGTTGACAATGACAGTTGGGTCTCCGCCAATGGTGATTTTGCGTTAGGATTCTTTAACATTTCAGATCAACCTAATGAGTTCAGGATTGGCATTTGTTTCAATTCAAAGTCTATACCATTTAGCCAACAAACTGTGGTCTGGGTTGCTGGAGCTCATGTCACTGTGGGTGGCATGTCCTATTTTGAATTCACCCCCGAAGGAGAACTTGTCCTCTTTGATTCAGTACAGGGAGTAGTAGTATGGACCAGTGGAACTGCCAATCAATATGTAGTTTCGGCTACCTTTCGTGACAATGGCAATCTTGAGCTCATTAACAGAGAGCAACATGTTGTTTGGCAGAGTTTTGATACTCCATCTGATACGCTAGTCCCAGGGCAGAGTCTATCTGTGTATCAAACTCTCCGAGCTGCCAGCAAGCAAACCACGTCTAGTTACTACAGTCTCTATTTGAATGGCTCAGGACGGCTACGTCTTCGATGGGAAAGTAATGTTACGTATTGGACAAGTGACAACCCTTCTATTGCAAATCTGACTGCTTGTCTCACTACCACTGGATCCCTGCAACTTCAAGACCAAAGTTCAAAACCTGTTTGGTCTGTGTTTGGTGATGACCACAATGAATCAGTGAACTATAGGTTTCTTAGGCTTGATCTGGATGGCAATCTGCGCATTTATTCTTGGATAGAAACATTACAATCTTGGAGATCAGTATGGCAAGCTGTGGAGAATCAGTGCAAGGTCTTTGCGACTTGTGGTCAACGTGGTATGTGTTTCTTAAATGCCTCAGGTTCTGCTGATTGCAAGTGCCCGTTTGAGTTAGCTGACCCTAACAAATGTTTGGTTCCATACGATGAGGCATGTGAATCTGACATCAATATGCTTACATACGAGAAAACATTTCTTTATGGAATTTACCCACCTGAAGATTCAATTACCATAAGTAGTTTGCAGCATTGCAAACAATTGTGTTTGAATGATCCACAATGTACAGTCGCAACCTTTTCCAATGATGGAAGTGGTCAATGCTCAATAAAGAAAACTAAGTATATCACTGGCTATGCGGATCCATCTCTAACCTCAATATCTTTTGTTAAGAGATGTTCGGGTCCATTAGCCGTGAATCCTGGTCCTATTAATTCACCCCCTCCCAAGCAGCCTCCAGCACTCTGTGTTCCCTGTTTGATTGGAGCAGCCTCTGCCACTTTCTTCTTCTTTGCCATCATACAGCTGGGAGTTGGTTTCTGGATCTGCAGAAGAAGAAACATCACTAGGAAAGAAGCTACTTTAGCTTTGACATGCCCCAACTCGAAGGGTTTGTTGTTGTTGTCCTTCTCAGAGATAAAGAGCCTCACCGGGGATTTCAAGAACCAAATTGGTCCAAACATGTTCAAGGGTGCATTACAGAACAATCACTTGGTTGCAGTTAAGAATCTGAATACAAGCATAGAAGAAAGGAGGTTCAGGAGCGTTGTTACAAAGATAGGAAGCATCCATCACAAGAACCTAGTGAAACTGGAGGGCTATTGTTGTGAGTTCAATCACAGATTCTTGGTGTACGAGTATGTCAAGAATGGTTCTCTGGATAAGTTCTTAGGCAATTCATCGCTTTGCAGGAGGCTAACTTGGAAAAAGAGACTTGAGATATGCTCAGGTGTGGCAAAATCCATTTGCTATTTGCACACTGAGTGCCGGGAATTCCTTAGCCATGGCAATCTGAAGTGTGCAAATGTCTTACTGGACGAAAACTTGGAGGCCAAGGTAACTGAATATGGGCTTTCAAGAGTGGATGGTGAAGCATCATTTTGTAGTTCTTCAGCTGAGAAAGATGTGGAGGATTTTGGCAAGTTGGCACTAATTCTGTTATCTGGGCATCAAGACACTGAGGATCTTTGCCAATGGGCATATGAACAATGGATAGAAGGACAATCCAACAACGTGGTTGATAAAAGAGTCAAAGGTGGAATCGATTCAGAGGAGCTAGAACGTGCATTAAGAATAATATTCTGGTGTCTTCAAATGGATGAACGAAGGAGACCTTCAATGGGGGAGGTAGCAAGAGCGCTGGATGGTGGTATACCAAATGTTGATCTTCCTCCACCTCCTTTTGCTGTCCAGAGGCCTCTGCCAGAAGATGATGATACTTGA 2325 0.4314 MRVSSPLPLICSDLSLKLKNDMLELGSGQIRSPLLLCFFIGFLLHSAFTSEIPLGSKLSVVDNDSWVSANGDFALGFFNISDQPNEFRIGICFNSKSIPFSQQTVVWVAGAHVTVGGMSYFEFTPEGELVLFDSVQGVVVWTSGTANQYVVSATFRDNGNLELINREQHVVWQSFDTPSDTLVPGQSLSVYQTLRAASKQTTSSYYSLYLNGSGRLRLRWESNVTYWTSDNPSIANLTACLTTTGSLQLQDQSSKPVWSVFGDDHNESVNYRFLRLDLDGNLRIYSWIETLQSWRSVWQAVENQCKVFATCGQRGMCFLNASGSADCKCPFELADPNKCLVPYDEACESDINMLTYEKTFLYGIYPPEDSITISSLQHCKQLCLNDPQCTVATFSNDGSGQCSIKKTKYITGYADPSLTSISFVKRCSGPLAVNPGPINSPPPKQPPALCVPCLIGAASATFFFFAIIQLGVGFWICRRRNITRKEATLALTCPNSKGLLLLSFSEIKSLTGDFKNQIGPNMFKGALQNNHLVAVKNLNTSIEERRFRSVVTKIGSIHHKNLVKLEGYCCEFNHRFLVYEYVKNGSLDKFLGNSSLCRRLTWKKRLEICSGVAKSICYLHTECREFLSHGNLKCANVLLDENLEAKVTEYGLSRVDGEASFCSSSAEKDVEDFGKLALILLSGHQDTEDLCQWAYEQWIEGQSNNVVDKRVKGGIDSEELERALRIIFWCLQMDERRRPSMGEVARALDGGIPNVDLPPPPFAVQRPLPEDDDT 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1152 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 48 177 - -
Acco02g1152 774 SUPERFAMILY Protein kinase-like (PK-like) 523 748 IPR011009 -
Acco02g1152 774 Gene3D - 177 301 IPR036426 -
Acco02g1152 774 Gene3D - 46 176 IPR036426 -
Acco02g1152 774 ProSiteProfiles PAN/Apple domain profile. 347 427 IPR003609 -
Acco02g1152 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 478 581 - -
Acco02g1152 774 Pfam D-mannose binding lectin 104 194 IPR001480 -
Acco02g1152 774 PANTHER OS07G0415500 PROTEIN 32 762 - -
Acco02g1152 774 ProSiteProfiles Protein kinase domain profile. 504 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1152 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 101 181 IPR036426 -
Acco02g1152 774 SMART ntp_6 348 426 IPR003609 -
Acco02g1152 774 ProSiteProfiles Bulb-type lectin domain profile. 179 297 IPR001480 -
Acco02g1152 774 Gene3D Phosphorylase Kinase; domain 1 477 581 - -
Acco02g1152 774 ProSiteProfiles Bulb-type lectin domain profile. 51 176 IPR001480 -
Acco02g1152 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 582 660 - -
Acco02g1152 774 MobiDBLite consensus disorder prediction 751 774 - -
Acco02g1152 774 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 178 296 - -
Acco02g1152 774 SUPERFAMILY alpha-D-mannose-specific plant lectins 193 296 IPR036426 -
Acco02g1152 774 Gene3D Transferase(Phosphotransferase) domain 1 665 754 - -
Acco02g1152 774 Gene3D Transferase(Phosphotransferase) domain 1 582 664 - -
Acco02g1152 774 CDD B_lectin 67 178 IPR001480 -
Acco02g1152 774 SMART blect_4 57 178 IPR001480 -
Acco02g1152 774 PIRSF SRK 29 665 IPR024171 GO:0004674
Acco02g1152 774 PIRSF SRK 664 773 IPR024171 GO:0004674
Acco02g1152 774 Pfam S-locus glycoprotein domain 266 329 IPR000858 GO:0048544
Acco02g1152 774 Pfam PAN domain 363 424 IPR003609 -
Acco02g1152 774 Pfam Protein tyrosine and serine/threonine kinase 528 656 IPR001245 GO:0004672|GO:0006468
Acco02g1152 774 Gene3D Hepatocyte Growth Factor 356 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1152 Acco-ChrAcco02 8394811 8397913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1152 433 773 Receptor kinase-like Gene Family AT4G05200 28.272 1.34e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco02g1152 PK_Tyr_Ser-Thr 4.6e-20 CL0016