Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1150 ATGCAACAAAAACTGGACCACACTGCAAAGCGTTCTGGATCAGATATATGCAACGATAAACTATATGGTACCTGCTCTCAAGCTTGGTGGCATGACACAGGGCACGATGCCTTGGCTAAAGAGATGGCAGGTGAAGTCAAAATGAATTATTTTGTGTCTCAAAACTTGGATGCTAGTTTTGGGAACTTAACCAGTAATTCACAAGCTGTGACTCTTCTGGCTGATGGGAGGGAAGCTGGCAAAGAGAAAGGTGGAGAAAAGTACGAAGAACATCAACAAGAACAATTTTCTGTCCGTACTATGCCTTCAACAGTAAATGAATTTCTTGTGCCACCTAGACAATCAGAGGTTGCTGGCCATTCGACAACTTACGCTTATCCAGATCCACATTATGGGGGAGCAATTCCTACTTATGGACCTCAGCCTTTGATATATCCTCCTAGTCTTGGAGTGCATTCTTCTAGAATGGTTTTACCACTGCAAATGGAAGAAGAACCTGTGTATGTTAATGCCAAGCAATACCATGGAATTTTGAGGCGCAGGCAATCCCGTGCCAAGGCTGAGCTTGAAAAGAAGGTTATAAAAGCGAGGAAGCCCTATCTGCACGAGTCTCGGCATTTGCATGCCTTGAGAAGAGCAAGAGGGTGTGGGGGCCGTTTTCTGACAACAAAGAAAGTTGATGGTACTGCTGCAAACACAGCAAACAAGAACCAGGATACTGTTAGTTCATACCACAAAGGCATGTCTTCCAATTTGCCTGCCATTACTGATTCAAATTCTGGTTCCCGAGAAATCTTGAGTTCCCACCAATCAGACATGCACTCCAGCTCTAATGGCAACAACAATTATTACTCACAAGTTCAGGGATTGGAGCTGTCTGGTTATCGACCTCTCTCGACCGGGGCTCGCAGGGCCCTGACCATCAAATAA 930 0.4495 MQQKLDHTAKRSGSDICNDKLYGTCSQAWWHDTGHDALAKEMAGEVKMNYFVSQNLDASFGNLTSNSQAVTLLADGREAGKEKGGEKYEEHQQEQFSVRTMPSTVNEFLVPPRQSEVAGHSTTYAYPDPHYGGAIPTYGPQPLIYPPSLGVHSSRMVLPLQMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKARKPYLHESRHLHALRRARGCGGRFLTTKKVDGTAANTANKNQDTVSSYHKGMSSNLPAITDSNSGSREILSSHQSDMHSSSNGNNNYYSQVQGLELSGYRPLSTGARRALTIK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1150 309 MobiDBLite consensus disorder prediction 240 282 - -
Acco02g1150 309 Gene3D - 163 224 - -
Acco02g1150 309 ProSitePatterns NF-YA/HAP2 subunit signature. 168 188 IPR018362 GO:0003677|GO:0016602
Acco02g1150 309 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 70 281 IPR001289 GO:0003700|GO:0006355
Acco02g1150 309 PRINTS CCAAT-binding transcription factor subunit B signature 166 188 IPR001289 GO:0003700|GO:0006355
Acco02g1150 309 PRINTS CCAAT-binding transcription factor subunit B signature 197 220 IPR001289 GO:0003700|GO:0006355
Acco02g1150 309 ProSiteProfiles NF-YA/HAP2 family profile. 163 223 IPR001289 GO:0003700|GO:0006355
Acco02g1150 309 SMART cbf3 162 223 IPR001289 GO:0003700|GO:0006355
Acco02g1150 309 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 165 220 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1150 Acco-ChrAcco02 8379446 8382825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1150 61 242 CCAAT-HAP2 Transcription Factor Family AT3G20910 40.909 5.76e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Acco02g1150 CBFB_NFYA 3.6e-26 No_clan