Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1144 ATGGGTAATTGTTGTGTAACTCCGTCGAGACCTCGCGAGGCGAAGAAGAAGAAGAAGGAAAACCCCTTTGCCAACGACGACGTAAACTATGTCGGCAACGGTGGAAGCAAACTCTCCGTTTTGAAGGATCCGACGGGTCGCGACATCGAGCGGAAATACGAGCTGGGTCGCGAGCTTGGAAGGGGAGAATTCGGAATAACCTACCTGTGTACCGATAGAGAAACAGGTGAAGTTTTAGCTTGCAAATCAATATCGAAGAAGAAGCTGAGAACAGCCATAGATATCGAGGATGTAAGGAGAGAAGTTGAGATCATGAAGCATTTACCAGAGCATCCCAACATCGTGACCTTAAGGAACACCTATGAAGACGGCAATGCCGTTCATCTGGTGATGGAATTGTGCGAAGGAGGAGAATTGTTCGATCGGATTGTTGCGCGTGGGCACTACACGGAACGCGCCGCCGCAGTGGTCACCCGGACTATTGTCGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCATCGAGATCTCAAACCTGAGAACTTTTTGTTTGGAAATAAGAAAGAGACAGCACCTCTGAAGGCTATTGATTTTGGGCTGTCAGTTTTCTTTAAACCTGGTGAAAGATTTGATGAGATAGTTGGAAGTCCTTATTACATGGCTCCTGAGGTACTAAAACGGAACTATGGGCCTGAAGTAGATATATGGAGTGCTGGAGTAATTCTTTACATCCTTCTTTGTGGTGTCCCGCCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAAGCAATTATACGATCTGTTATTGATTTTAAAAGGGACCCATGGCCTAAAGTTTCTGATAATGCGAAAGACCTTGTGAAGAAAATGCTTGATCCTGACCCTAGGCGGCGACTTTCTGCACAGGAAGTGTTAGATCATCCATGGATACAGAATGCCAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAAGGCAAGGCTCAAGCAATTCGCAGGAATGAACAAGCTTAAGAAAAGAGCTCTAAGGGTGATTGCAGAGCATTTGTCTGTAGAAGAAGTTGCAGGTATAAAAGAAGGATTCAAGGTGATGGATACTAGCAATAGAGGAAAAATTGACCTTGATGAGCTACGGGCAGGGCTGCAAAAACTTGGCCATCAAATGGCTGATGCTGACGTTCAAATTCTGATGGAAGCGGGTGATACAGATAAAGATGGATACCTAGATTACGGAGAATTTGTAGCCATTTCTGTTCATCTGAGAAAGATGGGCAATGACGAGCACCTAAAGAAAGCCTTCCAGTTCTTCGATAAGAACCAGAGTGGATATATAGAGATTGAGGAGCTACGCAATGCCTTAGCTGATGAAGTTGACTCAAACAATGAAGAAGTCACTAGTGCAATCATGCATGATGTTGACACAGACAAGGATGGAAGAATAAGTTACGACGAATTTGCCGCAATGATGAAGGCTGGCACAGATTGGAGGAAAGCATCAAGACAGTATTCACGAGAGAGGTTCACAAGTCTCAGTCTGAAATTGATGAGGGACGGGTCCTTGTCACTAAACAATGACAACCAATAA 1590 0.4465 MGNCCVTPSRPREAKKKKKENPFANDDVNYVGNGGSKLSVLKDPTGRDIERKYELGRELGRGEFGITYLCTDRETGEVLACKSISKKKLRTAIDIEDVRREVEIMKHLPEHPNIVTLRNTYEDGNAVHLVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFDEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPRRRLSAQEVLDHPWIQNAKKAPNVSLGETVKARLKQFAGMNKLKKRALRVIAEHLSVEEVAGIKEGFKVMDTSNRGKIDLDELRAGLQKLGHQMADADVQILMEAGDTDKDGYLDYGEFVAISVHLRKMGNDEHLKKAFQFFDKNQSGYIEIEELRNALADEVDSNNEEVTSAIMHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMRDGSLSLNNDNQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1144 529 Pfam EF-hand domain pair 429 492 IPR002048 GO:0005509
Acco02g1144 529 CDD STKc_CAMK 52 310 - -
Acco02g1144 529 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Acco02g1144 529 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Acco02g1144 529 Gene3D Phosphorylase Kinase; domain 1 55 138 - -
Acco02g1144 529 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Acco02g1144 529 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1144 529 FunFam calcium-dependent protein kinase 13 139 319 - -
Acco02g1144 529 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1144 529 Gene3D - 320 494 - -
Acco02g1144 529 Pfam EF-hand domain pair 371 420 IPR002048 GO:0005509
Acco02g1144 529 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Acco02g1144 529 SUPERFAMILY Protein kinase-like (PK-like) 51 317 IPR011009 -
Acco02g1144 529 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Acco02g1144 529 MobiDBLite consensus disorder prediction 1 24 - -
Acco02g1144 529 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Acco02g1144 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 487 - -
Acco02g1144 529 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1144 529 FunFam Calcium-dependent protein kinase 1 55 138 - -
Acco02g1144 529 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Acco02g1144 529 CDD EFh 430 492 IPR002048 GO:0005509
Acco02g1144 529 SMART efh_1 358 386 IPR002048 GO:0005509
Acco02g1144 529 SMART efh_1 430 458 IPR002048 GO:0005509
Acco02g1144 529 SMART efh_1 394 422 IPR002048 GO:0005509
Acco02g1144 529 SMART efh_1 466 494 IPR002048 GO:0005509
Acco02g1144 529 MobiDBLite consensus disorder prediction 10 24 - -
Acco02g1144 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Acco02g1144 529 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Acco02g1144 529 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Acco02g1144 529 SUPERFAMILY EF-hand 335 504 IPR011992 -
Acco02g1144 529 FunFam Calcium-dependent protein kinase 7 320 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1144 Acco-ChrAcco02 8342057 8345523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1144 1 528 EF-hand Containing Proteins AT5G19450 78.799 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco02g1144 Pkinase 5.6e-76 CL0016