Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1108 ATGGCGAGGCGCAGCAGCAATATTGTGTGGGAAGATCTATCAGTGCAGGTTTCTGCTTTTGGAGGAGCCAACAAGAAGAAGCTTCTTCTTCATGCAAACACAGGCTTCGCTCAGTCGGCTCGTCTCATGGCTCTCTTGGGTCCTTCCGGCTCCGGCAAAACCACCCTCCTTCTCTCTCTTGTTGGAAGACTTCCTGCGAATGCTTCAATGACCGGCAACATCCTAATAAATGGAAAGAAGAGAAACTGGTATCACAGGGAGATGTCTTATGTTGCCCAAGAAGAGACATTCCTTGGAACTTTGACGGTGAGAGAAACTCTCATGTACTCTGCGAAGATGAGGTTGATATCAAAAATGACCAGCGAAGAGATAAGGAAGGTGGTTCAACACACTATAATGGAAATGGGACTTGAAGAATGTGCTGATACTCATATTGGGAACTGGCATTTGCGAGGAATCAGTAATGGTGAAAAGAAGAGACTGAGCATTGGCCTCGAGATTATGACGCAACCTAATGCGTTATTTCTCGATGAACCTACCAGTGGACTTGACAGCGCCTCAGCTTTCTACATAATCCAAGCCTTAAGTCAGATAGCTCGTGGTGGAAAAATAATTATGTGTTCGATTCACCAACCGAGTAGTGAAGTCTTCCATCTCTTTGACGATTTGCTTCTGCTCTCCGGTGGAGAAACTGTTTATTTCGGCGAAGCAAAGATGGCTTTAGAGTTTTTTGCTAATGCAGGCTTCCCTTGTCCAACTAGAAGAAACCCTCCAGATCACTTCCTTCTGTGCGTCAATTTGGACTTTGAATTGATTGCAACATCATCAAATTCTGCAATGGACTTGAAAACATCAGAGAGCAGAGCAGCCCTTATTCGAAGTTACAAAACATCAGAGACAATGGTCATTGCAAGAAGGAAGATTCAAAATCTGATATCTGACTTGCAGGAAGAACTGGTAACTGAGTCCGACATGAGAACAAGCACCAGCACTTGGTGGAACCAACTCTCCATTTTGACCCAACGATCTTTCCTGAACATGACTAGGGACATGGGCTATTACTGGCTCAGGATTATTTTCTACGTAATGGTCTCAATCAGTGTTGGAACCCAATTTTATCATATTGGTACGCACAACAACTCAATCTTAATAAGAGGAAAGTGCATATCATTCATCTACGGCTTCATGATTTGTTTGTCATGTGGAGGATTGCCATTTTTCATTGAAGAATTGAAGGCGTTCTATGGTGAAAGGTCCAAAGGACATTATGGGGAGGCTGTGTTTGTACTATCAAACATCCTATCCTCGCTCCCTTTCCTTATTCTCACATCGGTCTTATCTGGGACGATCATATACTACATGGTGCAGTTTCATCCAGGCTTAACTCATTTTGCATTCTTCTGCATCAACCTGTTCTTCTGCTTATTAGTTGTTGAAGGCTGCATTATGGTTGTTGCTTCAATGGTTCCCAATGTCCTAATGGGCATAGGAATAGGAACTGGTGCAGTAATCTTTATGATGATGTCTTCCCAAATCTTCAGACCATTACCTGACATTCCCAAGTTCTTTTGGCGCTACCCTATGTCCTACCTAAGTTTTGCAACTTGGGCTGTACAGGGACAATACAAGAATGACATGGTGGGGCTAGAGTTTGACGCTCTGCTTCCTGGAGAGTCAAGAGTGAAGGGAGAGCAAATCCTGAAGACAATGTTTGGGGTTCCATTGGATCATGGCAAGTGGTGGGACCTAACAGCGTTGCTTTTATTACTGTTACTTCACCGAATGCTCCTCTTTGTTGTGCTTAAGTACAACAATAGGCCCAAAATTTGCATGCTGTGGTATCATGCAAAGGGATTTGCGGGAAGATTTTCACCAAGTAAAAAGCCATCCGTCTCTTCCAAGAAGCAACTTGCTCCTCGGCCATTATCTTCTCAGGAGGGTCTCATGTCTCCGAATTTCGCAATTTGA 1968 0.4375 MARRSSNIVWEDLSVQVSAFGGANKKKLLLHANTGFAQSARLMALLGPSGSGKTTLLLSLVGRLPANASMTGNILINGKKRNWYHREMSYVAQEETFLGTLTVRETLMYSAKMRLISKMTSEEIRKVVQHTIMEMGLEECADTHIGNWHLRGISNGEKKRLSIGLEIMTQPNALFLDEPTSGLDSASAFYIIQALSQIARGGKIIMCSIHQPSSEVFHLFDDLLLLSGGETVYFGEAKMALEFFANAGFPCPTRRNPPDHFLLCVNLDFELIATSSNSAMDLKTSESRAALIRSYKTSETMVIARRKIQNLISDLQEELVTESDMRTSTSTWWNQLSILTQRSFLNMTRDMGYYWLRIIFYVMVSISVGTQFYHIGTHNNSILIRGKCISFIYGFMICLSCGGLPFFIEELKAFYGERSKGHYGEAVFVLSNILSSLPFLILTSVLSGTIIYYMVQFHPGLTHFAFFCINLFFCLLVVEGCIMVVASMVPNVLMGIGIGTGAVIFMMMSSQIFRPLPDIPKFFWRYPMSYLSFATWAVQGQYKNDMVGLEFDALLPGESRVKGEQILKTMFGVPLDHGKWWDLTALLLLLLLHRMLLFVVLKYNNRPKICMLWYHAKGFAGRFSPSKKPSVSSKKQLAPRPLSSQEGLMSPNFAI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1108 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 8 253 IPR003439 GO:0005524
Acco02g1108 655 MobiDBLite consensus disorder prediction 624 655 - -
Acco02g1108 655 Pfam ABC-2 type transporter 335 540 IPR013525 GO:0016020|GO:0140359
Acco02g1108 655 SMART AAA_5 39 230 IPR003593 GO:0016887
Acco02g1108 655 MobiDBLite consensus disorder prediction 626 655 - -
Acco02g1108 655 Pfam ABC transporter 41 181 IPR003439 GO:0005524
Acco02g1108 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 611 - -
Acco02g1108 655 Gene3D - 2 247 IPR027417 -
Acco02g1108 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 244 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1108 Acco-ChrAcco02 8031746 8036113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1108 37 222 Calmodulin-binding Proteins AT2G36910 28.856 6.10e-12 67.4