Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1099 ATGGAGGGGCTGTTGAAAGACTTCGTTATCGAGCACAAGAGACCATCTATTGAAGCTTCAAAGCGATGGAGATTCGCGGTCGCTCTGGTAAAGAACCACCGCAGGCGCTTCCGCATGGTCCCGGATCTCCAGAAACGCTCCGAAGCTGAACAAACAAGGAAGCAGAATCAGGATAAAGTTCGAGTCGCTCTCTATGTTCAAAAGGCAGCACTCCACTTCATTAGTGCTGGACGCCAACTACCAGAAGATGTGAGAGAAGCTGGTTTTGGCATTGAACCTGACGTAATTTCATCTATTGTTCGTGGCCACGATCATGAAGCACTCAAGAAATACGGTGGAGTCAAAGAAATCTCAACAAAACTCTCTACCTCACTAGACAAAGGTATTAACGAAGACAGTGTACATAAAAGACAACAAGTTTATGGGCTCAACCGTTACACAGAAAAACCTTCCAGAAGCTTCCTCATGTTTGTATGGGAAGCCCTACATGATTTAACTTTAATTATTCTCATGGTTTGTGCTTTAGTATCTATGGGTGTAGGGATTGCCACTGAACAATGGCCTGAGAGTATGTATGATGGTTTAGGAATCATATTTAGTGTGTTTTTGGTGGTCATTGTTACTGCTGTTAGTGACTACCAACAATCCTTACAGTTCAGAGCTTTAGACAAAGAGAAGAAGAAGATATTGGTTCAAGTCATTAGAAAAGGAACAAGACAAAAAATTTCAATTTTTGACGTTGTTGTGGGGGATATTGTTTATTTGGAAACGGGGGATCAAGTTCCAGCTGATGGGATTTACATATCAGGATACAACTTGTTGGTTGATGAGTCAAGTTTAACAGGTGAGAGTGAACAAGTAAATGTTCATGAACAAAACAAGCCATTTCTTCTTTCAGGGACCAAAGTGCAAGATGGTCAAGGCAAAATGTTAGTTACAAGCGTTGGAATGAGGACTGAATGGGGAAAACTAATGGAAGCTTTAAACGAAGGAGGGGAGGAGAGTGATGAGACCCCATTGCAAGTGAAACTTAATGGGGTCGCCACAATTATTGGTAAGATTGGTTTGGTTTTTGCTTTGATGACATTTTTGGTGCTGACAATAAGATTAGTGGTGGAAAAGGCAATTCATAATGAAGGTGATATTACTCATTGGTCTTCAAATGATGCAACAAAGTTGCTAAATTTTTTTGCTATTTCTGTTACAATTATTGTTGTTGCTGTTCCAGAAGGATTACCCTTGGCTGTGACACTTAGTCTTGCTTTTGCAATGAAAGAATTAATGAATGAAAGAGCACTTGTGAGGCATCTTTCGGCATGTGAGACAATGGGTTCAGTTAGTTCTATTTGCACAGATAAGACAGGTACATTAACCACTAACCATATGGCAGTTGATAAAATATGGATATGTGAAAAGGCCATGGAAATCAAAGGCAAAAATTATGAAAGTAGAGAGAAACTGAAACAAGAGATATCTGAAGGAGTTTTAGACATCCTTTTGCAAGCTATATTTCAAAATACTTCTTCTGAAGTAGTTAAGGACAGAGATGGGAATAATTCAATACTGGGAACACCAACAGAATCTGCATTATTGGAATTTGGCTTGCTTTTGGGTGGTGATTTTGATGCTCAGCGCAGACATTATAGAATACTTGAGATTGAACCTTTTAATTCGGTTCGAAAGAAGATGTCTGTTCTTGTAGGTCTTCCTGAAGGAAGAGGGACACGAGCTTTCTGCAAAGGTGCATCAGAGATAATACTAAAAATGTGTGATAAATTTATTGATTCCAATGGAGAAACCATTGATCTTCTTGAAGAACAAGTAAATAATATTTCTGATGTTATAAGCAACTTTTCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTGTCAAAGATATGAATGAAAAGCAAGATAAAATGAGTGTCATCCCTGATAATGGCTACACACTTGTAGCCATTGTAGGAATCAAGGATCCTGTTCGCCCTGAGGTCAAGAACGCCGTTAAAACTTGTTTGGCAGCCGGAATAACAGTTCGTATGGTCACCGGCGATAACATACATACAGCTAAGGCTATAGCTAAAGAATGTGGCATCCTCACTGAGGATGGTATAGCCATAGAAGGATCAAAATTTCGCAACTTGTCGCATGAACAAATAAAGGATTTGATGCCAAGAATCCAGGTCATGGCACGATCCTTGCCACTTGATAAGCATAAGTTGGTGTCCCATTTGAGGAATACTTTTGGTGAAGTTGTTGCTGTTACCGGTGATGGAACCAACGATGCTCCTGCACTCCATGAAGCAGACATTGGACTTGCCATGGGCATTGCTGGAACAGAGGTTGCCAAACAAAATGCAGATGTAATCATAATGGATGATAACTTCAAGACAATTGTGAGAGTGGCCAATTGGGGACGGGCAGTATACAGGAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTAAATGTTGTTGCTCTAGTGATCAACTTTGTTTCTGCATGCATCACAGGATCTACCCCGTTAACAGCTCTGCAATTACTATGGGTAAATATGATTATGGACACACTAGGGGCTCTAGCCCTAGCCACTGAGCCTCCTCATGATGGACTTATGAAAAGACCCCCAGTTGCGAAGGGGGCAAGTTTTATCACCAAAACCATGTGGAGGAATATCATTGGACAAAGCATGTATCAGTTAATAGTCCTTGCCATGCTCAATTTTGAAGGCAAGAGGCTCCTCAGAATCACCGGTTCAGATGCAACCATTGTCCTCAACACTTTGATATTCAACTCCTTTGTTTTTTGCCAGGTGTTCAATGAGATAAACAGCCGAGATATAGAGAAGATAAACGTGTTGAGAGGCATAACGAAGAGCTGGACATTTTTAGGCATAGTGTTTATCACAGTGGGATTTCAAGTGATAATAGTTGAGTTTCTGGGGAAATTTGCAAGCACAGTGCATCTGAACTGGAAACTCTGGTTACTCAGTATCGTGATTGGAGCAATGAGCATGCCAATATCTGCCATTGTCAAGTGCATCCCAGTTGAAAGAGATTCAATAATATTCCAAAGTTGTCGTCGTCATCATGATGGTTACGATATATTGCCTCCTTATGATCCCCATCAGCTTGCATAA 3138 0.4044 MEGLLKDFVIEHKRPSIEASKRWRFAVALVKNHRRRFRMVPDLQKRSEAEQTRKQNQDKVRVALYVQKAALHFISAGRQLPEDVREAGFGIEPDVISSIVRGHDHEALKKYGGVKEISTKLSTSLDKGINEDSVHKRQQVYGLNRYTEKPSRSFLMFVWEALHDLTLIILMVCALVSMGVGIATEQWPESMYDGLGIIFSVFLVVIVTAVSDYQQSLQFRALDKEKKKILVQVIRKGTRQKISIFDVVVGDIVYLETGDQVPADGIYISGYNLLVDESSLTGESEQVNVHEQNKPFLLSGTKVQDGQGKMLVTSVGMRTEWGKLMEALNEGGEESDETPLQVKLNGVATIIGKIGLVFALMTFLVLTIRLVVEKAIHNEGDITHWSSNDATKLLNFFAISVTIIVVAVPEGLPLAVTLSLAFAMKELMNERALVRHLSACETMGSVSSICTDKTGTLTTNHMAVDKIWICEKAMEIKGKNYESREKLKQEISEGVLDILLQAIFQNTSSEVVKDRDGNNSILGTPTESALLEFGLLLGGDFDAQRRHYRILEIEPFNSVRKKMSVLVGLPEGRGTRAFCKGASEIILKMCDKFIDSNGETIDLLEEQVNNISDVISNFSSEALRTLCLAVKDMNEKQDKMSVIPDNGYTLVAIVGIKDPVRPEVKNAVKTCLAAGITVRMVTGDNIHTAKAIAKECGILTEDGIAIEGSKFRNLSHEQIKDLMPRIQVMARSLPLDKHKLVSHLRNTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKQNADVIIMDDNFKTIVRVANWGRAVYRNIQKFVQFQLTVNVVALVINFVSACITGSTPLTALQLLWVNMIMDTLGALALATEPPHDGLMKRPPVAKGASFITKTMWRNIIGQSMYQLIVLAMLNFEGKRLLRITGSDATIVLNTLIFNSFVFCQVFNEINSRDIEKINVLRGITKSWTFLGIVFITVGFQVIIVEFLGKFASTVHLNWKLWLLSIVIGAMSMPISAIVKCIPVERDSIIFQSCRRHHDGYDILPPYDPHQLA 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1099 1045 CDD P-type_ATPase_Ca_PMCA-like 134 888 - -
Acco02g1099 1045 SUPERFAMILY Calcium ATPase, transduction domain A 230 326 IPR008250 -
Acco02g1099 1045 PANTHER CATION TRANSPORTING ATPASE 57 1016 - -
Acco02g1099 1045 Gene3D - 160 1014 - -
Acco02g1099 1045 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 Gene3D - 127 329 - -
Acco02g1099 1045 SFLD p-type atpase 432 807 IPR044492 -
Acco02g1099 1045 Coils Coil 601 621 - -
Acco02g1099 1045 FunFam Calcium-transporting ATPase 652 800 - -
Acco02g1099 1045 Pfam Cation transporting ATPase, C-terminus 840 1013 IPR006068 -
Acco02g1099 1045 FunFam Calcium-transporting ATPase 460 659 - -
Acco02g1099 1045 Gene3D - 447 800 IPR023214 -
Acco02g1099 1045 Gene3D - 460 659 IPR023299 GO:0000166
Acco02g1099 1045 FunFam Calcium-transporting ATPase 15 75 - -
Acco02g1099 1045 Pfam Cation transporter/ATPase, N-terminus 112 177 IPR004014 -
Acco02g1099 1045 SFLD Haloacid Dehalogenase 432 807 - -
Acco02g1099 1045 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 276 290 - -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Acco02g1099 1045 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Acco02g1099 1045 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Acco02g1099 1045 Pfam E1-E2 ATPase 231 429 - -
Acco02g1099 1045 SUPERFAMILY HAD-like 449 860 IPR036412 -
Acco02g1099 1045 SMART Cation_ATPase_N_a_2 104 182 IPR004014 -
Acco02g1099 1045 Gene3D - 15 75 - -
Acco02g1099 1045 FunFam Calcium-transporting ATPase 772 1018 - -
Acco02g1099 1045 SUPERFAMILY Calcium ATPase, transmembrane domain M 111 1016 IPR023298 -
Acco02g1099 1045 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 664 IPR023299 GO:0000166
Acco02g1099 1045 NCBIfam calcium-translocating P-type ATPase, PMCA-type 106 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Acco02g1099 1045 NCBIfam HAD-IC family P-type ATPase 197 370 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 NCBIfam HAD-IC family P-type ATPase 549 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 NCBIfam HAD-IC family P-type ATPase 725 842 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 NCBIfam HAD-IC family P-type ATPase 387 472 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco02g1099 1045 FunFam Calcium-transporting ATPase 207 329 - -
Acco02g1099 1045 Pfam haloacid dehalogenase-like hydrolase 449 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1099 Acco-ChrAcco02 7940112 7948994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1099 58 1040 Primary Pumps ATPases AT3G57330 68.756 0.0 1380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1099 02 7940112 7948994 Acco06g1156 06 7936412 7944758 CCT
Acco02g1099 02 7940112 7948994 Acco02g1099 02 7940112 7948994 ECH