Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g1088 | ATGTTCAGTTCATCGGCATATATAGGGCTTGCCCACTCTGTACAATCGGAGCCCTGTTCACTGTTGTTTAACTGGGTTAGCCGTCGGAGGTGTGGCGCCGTGAGGGTGGTGCCGGAAGCTCTGAAAATCAGAATGTTATTCTTGACTCGCATCAACACTTTCGCAAGATTTCTCTCCTCCTCCTCTCTCTTCTGCAACTCACTCCAGCATGGAAGTAGAGGAACAATAACCAGGATGGGCATGAAAACCCGGTCACTTTCTTCTGTAGTTGAAGCTTCAGATTTAGAATTCGAGCTGATCGATGAGGATGTAAAGGCAACAGAGAAAGATTCTGCACTACGCTTAGCTGTTTCACAACTTGCTAATGAGTTTACCAGAGAGTCAATGTTATCTTTGCGGAAATTTTTTTGTACACGTCGTGCACATGTGATTTCCACAGGCTCCCTGAAGCTGGACCTAGCTCTTGGAGTTGGAGGGTTACCGAAGGGTAGAATCGTGGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTCATAAAAGAAGCTCAGAAGCTTGGAGGATATTGTGCATATCTTGACGTAGAAAATGCATTGGACCTTTCACTTGTAGAATCAATTGGTGTAAATACTGAAAAACTTCTTGTCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTGACAAAAAGTGGAGCTGTGGACGTGATTGTAATTGACAGCGTTGCTGCCCTTGTCCCACAACGTGAGCTTGATCAATTAGGAGTTGTCTATAAACGAGATTTTCTGAAGCAATTAATGACTCAAGCACTACGGAAAATTCAGTATTCACTGTCTCACTCTCGAACTCTTATCATTTTCATTAATCAGGTTAGATTAAGTCCAAAATCAGGCCAGGCATATGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTAGGCTTCTATGCAGCTGTACGCTTGAGACTTTCAAGAATGGGGTTGTTGAAAACTCAGGATCGGCCAGAGGGTCTTGCAGTCTGCGTGCAGGTGGTAAAGAATAAACTGGCACCTGCAATGAAAAAGGCTGAACTGGGGATCAAGTTTGGAAGAGGATTTTGCCTTGAAACTGAGGCGTTAGATTTGGCTTGTGAGCATGGAGCGATTGTAAAACAAGGAGACGGCTACCTCATTGGAGGTTTGTTTTTTGATAGTAAACTTGCAGCTGAACGTTATTTGGTTGAAAATGATGGGATTCTTGATAAATTGGTCGCGGACTTGAGGCAAGTTTTGTTTTAA | 1305 | 0.436 | MFSSSAYIGLAHSVQSEPCSLLFNWVSRRRCGAVRVVPEALKIRMLFLTRINTFARFLSSSSLFCNSLQHGSRGTITRMGMKTRSLSSVVEASDLEFELIDEDVKATEKDSALRLAVSQLANEFTRESMLSLRKFFCTRRAHVISTGSLKLDLALGVGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKLGGYCAYLDVENALDLSLVESIGVNTEKLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPQRELDQLGVVYKRDFLKQLMTQALRKIQYSLSHSRTLIIFINQVRLSPKSGQAYGPVEEVTCGGNALGFYAAVRLRLSRMGLLKTQDRPEGLAVCVQVVKNKLAPAMKKAELGIKFGRGFCLETEALDLACEHGAIVKQGDGYLIGGLFFDSKLAAERYLVENDGILDKLVADLRQVLF | 434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g1088 | 434 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 138 | 373 | IPR027417 | - | |
| Acco02g1088 | 434 | Pfam | recA bacterial DNA recombination protein | 112 | 375 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | SMART | AAA_5 | 162 | 336 | IPR003593 | GO:0016887 | |
| Acco02g1088 | 434 | ProSiteProfiles | RecA family profile 1. | 140 | 299 | IPR020588 | GO:0003677|GO:0005524|GO:0006281|GO:0140664 | |
| Acco02g1088 | 434 | Gene3D | - | 139 | 426 | IPR027417 | - | |
| Acco02g1088 | 434 | PRINTS | RecA protein signature | 232 | 261 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | PRINTS | RecA protein signature | 351 | 380 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | PRINTS | RecA protein signature | 198 | 227 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | PRINTS | RecA protein signature | 318 | 346 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | PRINTS | RecA protein signature | 270 | 299 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | PANTHER | RECA | 101 | 433 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | CDD | RecA | 143 | 376 | IPR013765 | GO:0003697|GO:0005524|GO:0006281 | |
| Acco02g1088 | 434 | ProSiteProfiles | RecA family profile 2. | 306 | 380 | IPR020587 | GO:0003677|GO:0005524|GO:0006259|GO:0008094 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g1088 | Acco-ChrAcco02 | 7869306 | 7875029 | Dispersed |