Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1087 ATGGCAAAGTGGAAGTGCTGGTTCGGATGGGTGAAAATGTTATTCACTCCTGAGTCAAAGGACAAAAAGCCAAAGAAATGGGGATGGAATCTTGGAAGGTTTAGGCTGAAACAATGTCCCACGCTTACAGCACCAAATAGAGCACTTACCAAAGCAAGAGAAGAGCAGAGAAAGCATGCTTTGTCTGTGGCTATTGCAACAGCAGCTGCTGCAGAAGCTGCTGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCCGGCTAACTGGTTCTTCCCGTTCCTATTCTTATCTGTCCAAATACAACCGGAGCTTGGCCGCCATTAAAATTCAAAGCGCATACCGTGGACATCTTGCTAGGAAAGCATTGAGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAGTTCGTGGTCAAGCTGTGAGACGTCAAGTGTTCAGCACTTTGAAGCATTTGCCTTCCAGTGCAAGAGAGCTGGCAGAAATTCATGAAAGAAACAGTTTTAGTGCAGAAAAAAGCTACAAGAATGACGAGAGCAATCAGTTTTCATGGCAGAAAAAGAAGTTGGAAGAGAGGGAGATTAAGGAGACATTCCATGCTGATTGCCATGGTCAAAGGAATTGGGATTGCAGCTCGCATTCAAAAGAAGACATAGAAGCCATATGGTTGAGAAAACAAGAGGCCACTATCAAAAGAGAACGCATGAAACAGTATTCCTTCTCACACAGGGAGAGAAAAAATTCCCACATGATAGAAGAATATGGGCCTGATAAGGATTTTGGAAGAGAGGGCTGCCGTACACTGCGACAATGGCTGCAGGAAGAAACAATGAACAGGGATGTGTTTCACAAACCAGATCTTCTCTCAAAATCAAGAGTCTTGCATGGTTCGACACAAGTCTCACTGAAGAGCGTGAAAAGAGAAGAGTCACAGGAAGGATTGATTTCACAGATCTCACTTCCAAGGAAATCATTTTCTCACATAAAGAAAGTGTCACTTGCAGATGATATTTCCATGCCAAATTCTCCGGTTTTCCCAACTTACATGGCTGTGACGGAATCTGCCAAGGCAAAGGCAAGATCTATAAGCTCACCAAGGCAAAGAACTAAGTTTCTTGAATTACTCCCCCATCAGAGTGAGCCTCACAAGGAAGGCATATCTCTGTGGTCTTCTAGTTACGGTGCGCCTGCCAGCACCAATACAAACAATGAGGCCTTTTGGCAGAGATGTTAG 1230 0.4455 MAKWKCWFGWVKMLFTPESKDKKPKKWGWNLGRFRLKQCPTLTAPNRALTKAREEQRKHALSVAIATAAAAEAAVAAAHAAAEVVRLTGSSRSYSYLSKYNRSLAAIKIQSAYRGHLARKALRALKGVVRLQAIVRGQAVRRQVFSTLKHLPSSARELAEIHERNSFSAEKSYKNDESNQFSWQKKKLEEREIKETFHADCHGQRNWDCSSHSKEDIEAIWLRKQEATIKRERMKQYSFSHRERKNSHMIEEYGPDKDFGREGCRTLRQWLQEETMNRDVFHKPDLLSKSRVLHGSTQVSLKSVKREESQEGLISQISLPRKSFSHIKKVSLADDISMPNSPVFPTYMAVTESAKAKARSISSPRQRTKFLELLPHQSEPHKEGISLWSSSYGAPASTNTNNEAFWQRC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1087 409 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Acco02g1087 409 Pfam Protein of unknown function (DUF4005) 340 372 IPR025064 -
Acco02g1087 409 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Acco02g1087 409 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Acco02g1087 409 PANTHER IQ-DOMAIN 5-RELATED 4 390 - -
Acco02g1087 409 Gene3D - 101 151 - -
Acco02g1087 409 SMART iq_5 101 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1087 Acco-ChrAcco02 7866570 7868525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1087 1 390 IQD Protein Family AT5G03960 44.221 1.21e-73 234