Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1071 ATGGGTAGTAGAACAGTAAAGACTAGGACCGACGACAATAACAAATTTGCCAACGGCATGCCGAGTTACGCCCCTCCGCTGCCTACTTCTTCTTCCATGGGTACGGAAGGAAATTCTGTTCTTCCTTCCCGAATTTCTGAATTTGGAGGCATTGATCAATCTTTTGGATTTCGTGTGGAGGATGCTATCAATCTTAGCCGAAATCCAGTATTCAATCAAATGAAGTCAAATAACCAACCTCTGGGTGTTAATGTTCAGTTTGGCGCTTTAAATAAGAATGAATCAAATTCCAATCTGGCTTCTACATCTGGTGGCCAGCGTGAGAACTGGGGGGAGTCTAACATGGCAGATGGAAGCCCACGGACTGACACTTCAACAGATGATACAGATGATAAAAATCAAAGGTCTGAGAGGGGTCAATTAGCTGTTGGGGCCTCTGATTCCAGTGAGAGATCAAAAGATAAATCAGATCAGAAGACATTACGACGCCTAGCTCAAAATCGTGAAGCTGCTAGGAAAAGTCGGCTACGAAAAAAGGCATATGTGCAGCAATTAGAAAGTAGCAGGCTGAAACTGACTCAACTTGAGCAGGAGCTCCAACGAGCTCGCCAGCAGGGCATATTTATTTCAAGTATGGGAGATCAGTCTCATTCAATGAGTGGAAATGGTGCAATGACCTTTGATGTAGAGTATGCACGTTGGTTAGAAGAACATAACCGGCAGATAAATGAGCTAAGGGCTGCAGTCAATTCTCATGCTGGAGATATTGAACTTCGGACAATTGTTGACAATGTTATGTCACACTATGAAGAAATTTTCAGGCTTAAGGGTGTTGCAGCAAAAGCTGATGTCTTCCACATACTATCTGGAATGTGGAAAACACCAGCTGAGAGATGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAGCTTCTCAAGCTTCTTGGAAACCATTTGGAGCCATTGACAGAGCAACAGTTGATGAACATTTACAGCTTGCAACAGTCATCCCAGCAGGCCGAAGATGCGCTGTCCCAAGGAATGGATGCATTACAACAGTCATTAGCTGAGACTTTGGCTAATGAGTCATCCACACCTTCGGCACCTTCAGGAAATGTGGCAAATTATATGGGGCAGATGGCTATGGCCATGGGGAAGCTGGGTACTCTTGAGGGGTTTCTTCGGCAGGCTGACAATCTGCGACAGCAAACATTACAACAAATGTTGCGGATATTAACCACAAGGCAGTCGGCTCGAGCTCTTCTTGCAATAAGTGATTATTTCTCCAGGCTAAGAGCCTTGAGTTCGCTGTGGCTTGCCAGGCCAAGGGAGTGA 1335 0.4517 MGSRTVKTRTDDNNKFANGMPSYAPPLPTSSSMGTEGNSVLPSRISEFGGIDQSFGFRVEDAINLSRNPVFNQMKSNNQPLGVNVQFGALNKNESNSNLASTSGGQRENWGESNMADGSPRTDTSTDDTDDKNQRSERGQLAVGASDSSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSMGDQSHSMSGNGAMTFDVEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMSHYEEIFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLGNHLEPLTEQQLMNIYSLQQSSQQAEDALSQGMDALQQSLAETLANESSTPSAPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1071 444 Pfam Seed dormancy control 241 315 IPR025422 GO:0006351|GO:0043565
Acco02g1071 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Acco02g1071 444 MobiDBLite consensus disorder prediction 1 17 - -
Acco02g1071 444 CDD bZIP_HBP1b-like 159 211 - -
Acco02g1071 444 Pfam Basic region leucine zipper 155 201 IPR004827 GO:0003700|GO:0006355
Acco02g1071 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Acco02g1071 444 Coils Coil 178 205 - -
Acco02g1071 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
Acco02g1071 444 Gene3D - 158 212 - -
Acco02g1071 444 Coils Coil 235 255 - -
Acco02g1071 444 PANTHER TRANSCRIPTION FACTOR TGA9 102 444 - -
Acco02g1071 444 MobiDBLite consensus disorder prediction 94 122 - -
Acco02g1071 444 MobiDBLite consensus disorder prediction 1 38 - -
Acco02g1071 444 FunFam BZIP family transcription factor 158 207 - -
Acco02g1071 444 MobiDBLite consensus disorder prediction 123 137 - -
Acco02g1071 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Acco02g1071 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Acco02g1071 444 MobiDBLite consensus disorder prediction 24 38 - -
Acco02g1071 444 MobiDBLite consensus disorder prediction 94 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1071 Acco-ChrAcco02 7692821 7696667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1071 115 444 bZIP Transcription Factor Family AT3G12250 77.644 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco02g1071 DOG1 1.8e-32 No_clan