Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1056 ATGGGAATGGCCTGTGAGTCCCAATTTCATGTGCTGGCCGTCGACGACAGCCTAATCGATCGGAAGCTTATTGAGAGGCTCCTCAAAACCTCCTCCTATCAAGTTACCACTGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGACAATGATCAGACCGTCCCTAATACACCTTCCGTGTCTCCTCACAATAGTCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGCTATGACTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATTATGTCATCCGAAAATGTGCCTTCCAGGATTAGCAAGTGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCTGATCTAAATAAGCTTAGATCCCATATGATGAAGACACAGAAATTGGAGGATGAAGCACAAAAAAGAGATGAAAAGCTTGAAACCCCAGAGATTCAATTAGCACCACAATCACTAGTAGAACAACAACATCAACAGTCTGTGCAGATAGTCAATACTAACAAGAGGAAAACTGTGGAAGAGGGGCTTTCGCTTGAAACTGATAGAACAAGAACAAGATACAATGGCATAGCCACTATGGTCTGA 651 0.4316 MGMACESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRDNDQTVPNTPSVSPHNSQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNKLRSHMMKTQKLEDEAQKRDEKLETPEIQLAPQSLVEQQHQQSVQIVNTNKRKTVEEGLSLETDRTRTRYNGIATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1056 216 CDD REC_typeA_ARR 11 141 - -
Acco02g1056 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Acco02g1056 216 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Acco02g1056 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 192 IPR045279 GO:0009736
Acco02g1056 216 SUPERFAMILY CheY-like 8 164 IPR011006 -
Acco02g1056 216 Gene3D - 10 212 - -
Acco02g1056 216 SMART REC_2 9 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1056 Acco-ChrAcco02 7525348 7526656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1056 1 216 Response Regulator Gene Family AT3G57040 63.866 1.29e-92 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco02g1056 Response_reg 1.8e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1056 02 7525348 7526656 Acco02g1056 02 7525348 7526656 ECH