Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1033 ATGTTTCTGTATCACTTACTTGTAATTATTGAATTCTCGTATCAAGATCTTATAGTAGTCCCAGAATATGTTCAAGTATCTCTACCTGGGTTTGGATGGCGTGCAGGCCCCACATGGGTGCATCAATTGCATTATACTGTAATGAAGAATATGAAAACACGCTACTTTGTGACGTGTTTGGCACACGTCTCAACTGGATTGGAGGAACTGCTTAGAACTGGGTTATCTATATATTTATTACATTTGACAGCGAAAGAAGACGACGGGAACTTGGAGGGGAAGGTGCTGGAAACTCCTGTGGTCATGCCATACCTTGTCCGAGAGAAGTTATTTATTGGTAATATCAGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACGCATATTTTATCGGTTCTTAGCTCTGTTTCAATTTCATTCTTTTCTGAATGGCGAAGTAGCCTAACGATCCCGGCAAAGGAAATTAAGAAGGTATATGTGGGTGGTGGTCATGGTGGTACTCCTGATGATGATGACTTGGGTGAAATATCAAGGAGTCCGTTGTCACCGGACAACCTTTTGTACTCGTTGGAATATGCAGGTAAGGATTTGAAGTTGGTCAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATATCTTGGATTACTTGGATGTTTGCCTCAATTTTATTGATCGAAGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTGAGGAAGAGCTGTGAATTTGTTTGCCCAAATGATGGTTTTCTAGAACAGTTAAAAATGTTTGAGGAGATGGGCTTTAAGGTAGATCGCTCTAGCTCTATATACAAGCGCTTTCGTTTGAAAGTACTGGGTGAGAATTATAACTCGGGGGTGAGAATAGAGAGTTCTAAACTTGGAGCTGATCCCGGCATGCCTGTCAGTGTTGCTCCAGAAGTAGAAGGAGCTCCAAGAGCAGGAAATAATCGTAGTCCTACATACCGCTGTAAGAAGTGCCGGCGTGTGGTTGCATTGAAGGAGCATGTTGTAGACCATGTTCCCGGTGAAAGTGAGACGTCAAGCGAGTGGCACAAGTGGAAAAGTGACAGCCTCTCTAACAAATACAATGAATCTGAGTGTTCTTCCATATTTATAGAGCCACTACAATGGATGAAACCAGTTGAGGAAGGCGCATCGGAGGGGAAGTTGAGCTGTGTCCATTGTGACGCCCGCTTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGCGGAAGCTGGATAACCCCTGCTTTTCAGATCCACAAGTCCCGAGTGGACGCAAGCCCTATCTAA 1401 0.4361 MFLYHLLVIIEFSYQDLIVVPEYVQVSLPGFGWRAGPTWVHQLHYTVMKNMKTRYFVTCLAHVSTGLEELLRTGLSIYLLHLTAKEDDGNLEGKVLETPVVMPYLVREKLFIGNISDAAEILQNGSDEITHILSVLSSVSISFFSEWRSSLTIPAKEIKKVYVGGGHGGTPDDDDLGEISRSPLSPDNLLYSLEYAGKDLKLVRMAVPLRDTENENILDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMFEEMGFKVDRSSSIYKRFRLKVLGENYNSGVRIESSKLGADPGMPVSVAPEVEGAPRAGNNRSPTYRCKKCRRVVALKEHVVDHVPGESETSSEWHKWKSDSLSNKYNESECSSIFIEPLQWMKPVEEGASEGKLSCVHCDARLGNFNWFGIQCSCGSWITPAFQIHKSRVDASPI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1033 466 Gene3D Protein tyrosine phosphatase superfamily 105 314 IPR029021 -
Acco02g1033 466 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 218 273 IPR000387 GO:0016311|GO:0016791
Acco02g1033 466 ProSiteProfiles Dual specificity protein phosphatase domain profile. 102 297 IPR020422 GO:0006470|GO:0008138
Acco02g1033 466 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 102 463 - -
Acco02g1033 466 ProSitePatterns Tyrosine specific protein phosphatases active site. 239 249 IPR016130 GO:0016311|GO:0016791
Acco02g1033 466 Pfam Dual specificity phosphatase, catalytic domain 201 293 IPR000340 GO:0008138|GO:0016311
Acco02g1033 466 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 104 297 IPR029021 -
Acco02g1033 466 SMART dsp_5 102 294 IPR020422 GO:0006470|GO:0008138
Acco02g1033 466 FunFam Dual specificity protein phosphatase 12-like 105 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1033 Acco-ChrAcco02 7316219 7321988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1033 179 293 Protein tyrosine phosphatase (PTP) family AT3G06110 31.897 2.24e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1033 02 7316219 7321988 Acco02g1033 02 7316219 7321988 ECH