Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1031 ATGGGACTCTGTCATGGAAAACCTATTGAAATTTCACAAACTCATGGAGAAAACCCATTATATCCCGATGAAAAGGACGGGCTTCCAAAAGTTCGAACCCCCAAATCCTCAAACTTCCCCTTTTACAGCCCAAGTCCATTGCCAAGTCTGTTCAAGAACTCACCGGCAAATTCAAGTGTGAGCTCAACACCTTTGCGCATTTTCAAACGCCCATTCCCTCCTCCTTCGCCGGCGAAGCACATTCGGGCATTGCTCGCTCGCCGGCATGGTTCTGTGAAGCCAAACGAGGCCTCTATCCCTGAAGGAGGCGAATGCGAGATTGGGTTGTATAAGAACTTTGGCTTTTCGAAGCAATTCACAGCTCACTATGAACTTGACGAAGAGGTGGGTCGTGGCCACTTTGGGTATACTTGCTCCGCCAAGGGTAAAAAAGGCAGCATGAAGGGGCTGGATGTGGCTGTCAAAGTCGTTCCAAAATCCAAGATGACAACAGCAATTGCTATAGAGGATGTACGGAGAGAAGTAAGGATATTGCGGGTTCTTACAGGACATAAGAACCTAGTGCAATTTTATGAAGCCTATGAAGACGATGAAAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGTGAGCTGCTAGATAGGATTCTTTCCAGGGGCGGGAAGTACTCGGAAGAAGATGCCAAGGTTGTCATGATTCAGATATTAAGTGTGGTGGCCTTCTGTCATCTGCAGGGTGTGGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGAAAACGCCACATTGAAGGCAATTGATTTTGGACTGTCTGACTATGTGAAGCCAGAGGAGAGGTTGAATGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTTTACATAGATCATATGGGACAGAAGCAGACATGTGGAGCATTGGTGTTATTGCTTATATTCTTTTATGTGGAAGCCGGCCATTTTGGGCTCGGACAGAATCTGGCATATTTCGTGCTGTCCTGAAGACGGATCCAAGTTTTGATGATGCTCCTTGGCCTTCTTTATCAGCTGATGCTACAGATTTTGTGAAGAGGCTGTTGAATAAGGATTATCGTAAAAGATTAACTGCAGCTCAGGCTCTCTGTCATCCTTGGCTGGCTAATCATCATGAGGACTTGAAGATACCTTTTGATATAATAATCCTCAAACTTGTTAGAGCTTACATATCCTCATCTTCTTTACGCAAATCAGCATTAGGGGCTCTTGCAAAGACTTTAACAGTACCTCAGCTAGCATATCTCAGAGAACAATTTACACAGTTAGGGCCAAACAAAAATGGATTTATTTCCATGCAGAACTTTAAGACGGCTGTTTCAAGGAGCTCCACTGAAGCCACAGACGATTCAAGGGTCTTAGATTACGTGAGCATGGTTAGTTCTATCCAATACAAGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCCATAAGCATACACCAGCTAGAGGGAACGGAGAGCTGGGAGCAACATGCAAGGCGCGCTTATGAGCTGTTTGAAAAGGACGGGAATCGACCAATTATGATCGAAGAGCTCGCCTCAGAACTTGGACTTAGCCCTTCAGTACCTGTTCATGTGGTCCTCCAAGATTGGGTTAGACACGGGGATGGAAAGCTCAGTTTCTTAGGATTTGCCAGACTTCTGCACGGAACTTCATCCCGTACGATTCTGAAGGCGCAATAA 1737 0.4456 MGLCHGKPIEISQTHGENPLYPDEKDGLPKVRTPKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGECEIGLYKNFGFSKQFTAHYELDEEVGRGHFGYTCSAKGKKGSMKGLDVAVKVVPKSKMTTAIAIEDVRREVRILRVLTGHKNLVQFYEAYEDDENVYIVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENATLKAIDFGLSDYVKPEERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADATDFVKRLLNKDYRKRLTAAQALCHPWLANHHEDLKIPFDIIILKLVRAYISSSSLRKSALGALAKTLTVPQLAYLREQFTQLGPNKNGFISMQNFKTAVSRSSTEATDDSRVLDYVSMVSSIQYKKLDFEEFCAAAISIHQLEGTESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWVRHGDGKLSFLGFARLLHGTSSRTILKAQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1031 578 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1031 578 Gene3D - 409 569 - -
Acco02g1031 578 FunFam CDPK-related kinase 1 423 495 - -
Acco02g1031 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Acco02g1031 578 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1031 578 FunFam CDPK-related kinase 3 115 287 - -
Acco02g1031 578 SUPERFAMILY Protein kinase-like (PK-like) 120 443 IPR011009 -
Acco02g1031 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 548 - -
Acco02g1031 578 CDD STKc_CAMK 122 384 - -
Acco02g1031 578 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Acco02g1031 578 SUPERFAMILY EF-hand 419 567 IPR011992 -
Acco02g1031 578 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Acco02g1031 578 FunFam Calcium-dependent protein kinase SK5 295 389 - -
Acco02g1031 578 Gene3D Transferase(Phosphotransferase) domain 1 213 408 - -
Acco02g1031 578 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1031 578 FunFam CDPK-related kinase 1 116 211 - -
Acco02g1031 578 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Acco02g1031 578 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1031 Acco-ChrAcco02 7304795 7308020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1031 1 574 EF-hand Containing Proteins AT3G50530 65.714 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco02g1031 Pkinase 2.1e-69 CL0016