Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1029 ATGCAGCAGATGGAGAACTCAGAGCTCTACCAATTCCTCGCCGGTAACGGCGCTTCCTTCTTCACCCCCGCATCGTACGGCCTGCCTCCTCCTGCTGCAGCCGCCTCCACAATGCACAGTTTCTGCAGTTCCTCTTATTACCCCTTGGATTCTTCCGAAATTACGGATACACCCCACCAAGATAGAGCCCTCGCCGCTCTTAAGAATCACAAGGAGGCTGAGAAGCGCAGGCGAGAGAGGATCAATTCCCACCTCGATAAGCTTCGCACTCTTCTTCCCTGCAATTCTAAGACTGACAAGGCCTCGCTTCTAGCAAAGGTTGTCCAACGAGTGAGAGAGCTGAAACAGCAAACTTCACAAATCACCGAACTCGAAACCATTCCTTCAGAGACAGACGAAATCACCGTCCTCTCCACCAGCAGCGGCGACTACGACGGCGGAGACGGCAGGCTCATATTCAAAGCCTCATTATGCTGCGAAGATCGCTCCGATCTCATACCTGATCTCATCGAAATCCTAAAGTCGCTTCATCTCAAAACCCTCAAAGCAGAAATGGCAACACTAGGAGGAAGAACCCGAAACGTCCTTATTGTCGCCGCCGACAATGACCACAGCATCGAATCAATCCACTTCCTCCAGAACGCATTGAAATCTTTGCTCGAACGCTCCAATTCAAGCGAAAGATCTAAACGACGTCGTGCACTGGACCGCAAATTGATTGTCTGA 726 0.511 MQQMENSELYQFLAGNGASFFTPASYGLPPPAAAASTMHSFCSSSYYPLDSSEITDTPHQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTSQITELETIPSETDEITVLSTSSGDYDGGDGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLIVAADNDHSIESIHFLQNALKSLLERSNSSERSKRRRALDRKLIV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1029 241 FunFam transcription factor bHLH30 60 123 - -
Acco02g1029 241 SMART finulus 71 120 IPR011598 GO:0046983
Acco02g1029 241 Pfam Helix-loop-helix DNA-binding domain 69 114 IPR011598 GO:0046983
Acco02g1029 241 PANTHER TRANSCRIPTION FACTOR BHLH30 53 236 IPR045847 GO:0003700|GO:0006355
Acco02g1029 241 CDD bHLH_AtAIG1_like 60 136 - -
Acco02g1029 241 Gene3D - 60 126 IPR036638 GO:0046983
Acco02g1029 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983
Acco02g1029 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1029 Acco-ChrAcco02 7273370 7274894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1029 9 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 64.192 1.66e-86 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g1029 HLH 2.1e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1029 02 7273370 7274894 Acco02g1029 02 7273370 7274894 ECH