Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1003 ATGTCAGACAGAGTAACCCTGGGCGATGCTGATGACAGAAAGCTTAAGCGCAAGATGACTGAGGAGTCGTCCTCAGAGCCGCCGCCTCCTTCCATGGACGAGGACTCAGAGGGGCTTCTGACTCTGAAGCTGATGGTGGGGGGCGAACCAGCTGTGGCTGAGGCGGCAAACAACGAAGAGAGAGCAACAAGGAAGAATAACAATAATAACCAACAGCGAAACTTGGGTTGCAAGTTTTGCGACAAGAAGTTTCGTAGCTCTCAAGCTCTGGGTGGACACCAGAATGCTCACAAGCGTGAGCGTGTACTAAGCAGGCTTGACAGAAATATTGATATGGGCACTTTTGGATACTGTGGTGTTCACTTTTGCCCATGTTCAACCATGGCTAATTATACCTTCACTACCGGGTCACCTTTTTGTGCAGGGCTTTACCATCATCATCACATGATGAGCCTACTGGTGCCTCGTCATGGCTTGCAAGCGCCTGCAGCCAACTCGCCCCTAGAGGCGTTCCGGTTCGGCTCAAGGAGCTCCTGGGCCGACGACGACAACGGACCGGTTCAACGCAGAGGGAACCGCAGAAACAACGCTCGGAGTTCTTCACCAGGAAGTGCGAGTGCTATTGCTGGAGGCCTCGGGACGAACTCAGATATGGAAAGCCTTGATGATATGCCTTCAGACCTCGACTTGTCTCTCAGTCTTTAA 705 0.5234 MSDRVTLGDADDRKLKRKMTEESSSEPPPPSMDEDSEGLLTLKLMVGGEPAVAEAANNEERATRKNNNNNQQRNLGCKFCDKKFRSSQALGGHQNAHKRERVLSRLDRNIDMGTFGYCGVHFCPCSTMANYTFTTGSPFCAGLYHHHHMMSLLVPRHGLQAPAANSPLEAFRFGSRSSWADDDNGPVQRRGNRRNNARSSSPGSASAIAGGLGTNSDMESLDDMPSDLDLSLSL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1003 234 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Acco02g1003 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Acco02g1003 234 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 58 233 IPR044246 GO:0009788
Acco02g1003 234 MobiDBLite consensus disorder prediction 179 234 - -
Acco02g1003 234 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g1003 234 SUPERFAMILY beta-beta-alpha zinc fingers 73 102 IPR036236 -
Acco02g1003 234 Coils Coil 52 72 - -
Acco02g1003 234 Gene3D Classic Zinc Finger 55 111 - -
Acco02g1003 234 MobiDBLite consensus disorder prediction 1 40 - -
Acco02g1003 234 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1003 Acco-ChrAcco02 7046508 7047212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1003 73 146 C2H2 Transcription Factor Family AT1G24625 46.154 1.40e-10 57.4