Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0987 ATGGAACAAGAGCCGCTTCTGTCGAGTGAGGATATTCGTCGCACTCGTGGGAGTAATCCCATGCTCCGCGCCTCCACCTTACGCGCCACTTTCACCCTTCCCTTAACTCGCTACACCACCCGTCTGATCGCCGCCGAGCACCACCGGATTTTCCTTGGCGATTGTACGGAGAACCCGTCTGAGGACGACGATGACCGACCCCTTGAAGATAGCAGTTGCGCCTATTCGAGGCCCATTTTGGTTCTTGACCTTGTGTGGAACCTGGCCTTTGTACTGGTCACTGCTGGTGTGCTTCTTTCCACACTTAGCGAGCATCCGTCCACCCCTTTGAGGCTTTGGCTCTGCGGGTATGCCTTCGAGTGTGTTCTGCATATGGGTTTTGTGTGTTTTGAGTATTGGCGGAGGACTCGAGATTTTTACGGTGCTGAGCTTGGGCTTTCGTTTTCCCAGAGTTGGAACAGCAGTGTGAAGAAGTTAGAGTCTTTGAACACACTGGTATCATCTATTTGGTGGGTTCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAACTTTTGCAAGACTGTCCTCGTATCTACTGGTTAACAGTTGTCTTTCTAGCCTTCGATGTGTTTTTTATTATCTTTTGCATTGGGATGGTATGTATAGTTTTCTTTGCCCTCTTCTTCTTCATCCCAATAGTAGCATTAGCTTATGCTATGAGAATCAGAGAAGGTGCATCAGAAGATGATATCAGGTCTCTTCCTAAGTATAAGTTTAGTCAGTCAAATTCATTGGTGATGTTTGAAGACTGTCATAAGCAAGTTTCTCAAGCAAGAAAGTGTGCAAGCAATAGCAGCCTTGTCAGTGAATTATATCTCAACTCAGATGATTCTGAATGCTGCATTTGCCTTTCTCCATACGTTGAAGGGGCAGAGCTTTATCGCCTTCCCTGCACACACCATTTTCATTGTGGATGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCTCTCTGCAAATTTAATATTCTTAGAAGTGATACATTGGTCTGA 1038 0.4663 MEQEPLLSSEDIRRTRGSNPMLRASTLRATFTLPLTRYTTRLIAAEHHRIFLGDCTENPSEDDDDRPLEDSSCAYSRPILVLDLVWNLAFVLVTAGVLLSTLSEHPSTPLRLWLCGYAFECVLHMGFVCFEYWRRTRDFYGAELGLSFSQSWNSSVKKLESLNTLVSSIWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCIGMVCIVFFALFFFIPIVALAYAMRIREGASEDDIRSLPKYKFSQSNSLVMFEDCHKQVSQARKCASNSSLVSELYLNSDDSECCICLSPYVEGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRSDTLV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0987 345 SMART ring_2 294 334 IPR001841 -
Acco02g0987 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Acco02g0987 345 SUPERFAMILY RING/U-box 286 340 - -
Acco02g0987 345 PANTHER TARGET OF ERK KINASE MPK-1 69 339 - -
Acco02g0987 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 344 IPR013083 -
Acco02g0987 345 Pfam Ring finger domain 293 335 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0987 Acco-ChrAcco02 6929075 6932322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0987 74 342 C3H Transcription Factor Family AT1G68070 44.643 9.19e-83 253