Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0986 ATGCATGGAGGTGAAAGAGAAGAAAGCAAGTCCCAGAAGAAGAAACAGAAGGGAAAGCAGGATGGTGGTTCTGCATCAGCTGATGTCAATGAAGACAAACTGATCGATGACATTCTCGAATCAATCAATCCTTTGGATACCCTAAATGAGCATAACAGTGGCAATAAGGACTCAGTTGCATATACACTAATGATATGTGAAGTACTGAGAAGAAAGATATCACAAATTGAACAGGCAAACCAAGGGGATGTACTAGTCGTGAAGCGATCTGATTTAAGATCAGGAACTGTTATGTTGAGCAAAGGGCTTCGGACTAATAAACAGAAACGCATTGGAACTGTCCCTGGCTTCTATTTCAGAATGGAATTTGGCCAAGGTGGGTCTTGCCAGAGTAATGAACAGAATGATCAGAAGCTTGAAAGAGGGAATCTTGCATTAGAAAAGAGTCTGCATCGAGGTAATGAAGAAAGTGTCACAAGGGGTCTCAAGGAACCTTCAAGTTACAGAGCAAAGGTATATGTATATGATGGTCTTTACAGTGGCCAAGGTGGGTCTTGCCAGAGTAAAGAACAGAATGATCAGAAGCTTGAAAGAGGGAATCTTGCATTAGAAAAGAGTCTGCATCGAGGTAATGAAGAAAGTGTCACAAGGGGTCTCAAGGAATCTTCAAGTTACAGAGCAAAGCCTGAAAGATACATGATTTGGAAATCAATTAAGCTATGGACTGACAAGTCTACTTCGAGACCTGGGCTTATATTGCCTGATCTTACTTCTGGGGAAGAAAATTTACCTGTTTGTCTTGTAAATGATGTTGATGATGAAAAGGGTCCTGCATACTTTACTTACTGTCATACTTCAAAGAATTTGAAGCCAGTAATACATCCTGTGGAACCATCTACTGGATGTAACTGTATTAGTGGATGCTTACCTGGTAATTTGAGCTGTACTTGCATTCAAAAGAATGGAGCCTATTTGCCATATTCTGCAAATGGGGTACTCACGGACCTGAAATCTGTGATATATGAGTGTGGTCGTTATTGAGAAGTCATGGACAAATCTAGGGTTGAAAATCTTGGAAGTGAAAATGATGATGATGATGGTTATTATTATTATATTTTTTACTCTACACGCAGTTATCAGCAACTGGAAATCTTTCCTGGTGATACTGAAGCACCTAAGATACCGTATTCACTCTATATAACTGCGAGGAATAGTGGAAATCTTGGTCGCTTCATGAACCACAGTTGCTGTCCGAATTTGTTCTGGCGTCCTATCATGCGCACAAATACAGATCAGTGTGATCTTCATGTTGCTTTTCATGCAATCAGACACATCCCTCCTATAACAGAAAAATTCCCAAAGCTATGGCCAATTGATCTCATTTCATTCGCTCGACCCGGAGGCGGGAAAAGAAAACCCGCCCATTCCCAACAACGCAACCTGGTGTGGGTTTTTGCGGAAGAATTGAGATCACTGCGCAATCACCACCATCTGGCTGGCCGCCGTCTGGGAACTTTTTCCGCCGTTATGAGTAGCCTCAACAGCCACTCTCCCTCCGACCTTTTGGTCGTGGCTGTTGAACATTCCAAGCCTAAACCCAGAAGGCTCTACCAAGTCTGGAAGGGAAACAATAAATTTCTATGTGGGGGACGGTTAGTCTTTGGTCGGGATGCGAAGTCTCTTTTTCTAACCACATTCATGATTGGAGGTCCTGCACTGTTGTTCTGCATAAGAATGCTTTTAACTTTTAAAGATGATCCTCACTTTAGCTGTCCCGTACTGATTGGAGGATTGGTTCTCACATTTTTGGATTTTACTTTTTTGTCCTTGACTTGTTGTCGAGATCCAGGAATTATCCCCAGAAATTCACGCATACTTGAAGCAGATGAAGCACTTGACATAAACTCAGCATCTATGGAGTGGCTAAATAATAATTCCAACAGTGTGAAATTACCTCGAATGAAGGATGTGAAGATCAATGGCCATACAGTGAAAGTGAAGTTCTGTGATACTTGCTTGCTGTATCGTCCACCGCGGGCATCACATTGCTCAATCTGCAACAACTGTGTACAGAAGTTTGATCACCATTGCCCATGGGTGGGTCAGTGTATTGCAGCGCGAAACTATCCCTTCTTCGTTTTGTTCATATCATCAACAACCATGTTGTGTCTATATGTATTTGTGTTTTCCTGGATTAACATTGGTCGGAAAAGGGGCAAGTTAGGGCACAACATGGCACACGATGCTTTATCAGTTATTCTTATTGTATATTGCTTCGTAGTCATCTGGTTTGTGGGCGGCCTTACAGTTTTCCATCTTTATTTGATCTCTACCAATCAGACAACTTATGAGAATTTCCGGTACCGCTATGATAAGAAGGAAAACCCATATAGACAGGGAATAATGAAGAACTTTTTAGAACTGTCCTTTTCAAAGATTCCAGGTTCAGCGATCAATTTCAGAGCTTGGGTTACGGATGATACAGAACATGAATCCGCTGCTTCAAATCTTGATAGAGGCTTGATGAACTCAAAACAAAAATTTAACATGGACGTGGGAACAAAGAATGACAAGGATGGTCAAAAGCGACTTTCTAGTATTTTACAAGATTTGGATTACAATGGCGTTGATAATTTGAAGAAAGCAAAAGAGGAAAATGCACCATTTAACATTTTCGTTCCCGCTGAACAAGAATCAAAATATGCCCGATGGAATTCCAAAGTAGGAGTAGATGCTGAACATGATAAACCGACCGACCAATAG 2763 0.413 MHGGEREESKSQKKKQKGKQDGGSASADVNEDKLIDDILESINPLDTLNEHNSGNKDSVAYTLMICEVLRRKISQIEQANQGDVLVVKRSDLRSGTVMLSKGLRTNKQKRIGTVPGFYFRMEFGQGGSCQSNEQNDQKLERGNLALEKSLHRGNEESVTRGLKEPSSYRAKVYVYDGLYSGQGGSCQSKEQNDQKLERGNLALEKSLHRGNEESVTRGLKESSSYRAKPERYMIWKSIKLWTDKSTSRPGLILPDLTSGEENLPVCLVNDVDDEKGPAYFTYCHTSKNLKPVIHPVEPSTGCNCISGCLPGNLSCTCIQKNGAYLPYSANGVLTDLKSVIYECGRYXEVMDKSRVENLGSENDDDDGYYYYIFYSTRSYQQLEIFPGDTEAPKIPYSLYITARNSGNLGRFMNHSCCPNLFWRPIMRTNTDQCDLHVAFHAIRHIPPITEKFPKLWPIDLISFARPGGGKRKPAHSQQRNLVWVFAEELRSLRNHHHLAGRRLGTFSAVMSSLNSHSPSDLLVVAVEHSKPKPRRLYQVWKGNNKFLCGGRLVFGRDAKSLFLTTFMIGGPALLFCIRMLLTFKDDPHFSCPVLIGGLVLTFLDFTFLSLTCCRDPGIIPRNSRILEADEALDINSASMEWLNNNSNSVKLPRMKDVKINGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIAARNYPFFVLFISSTTMLCLYVFVFSWINIGRKRGKLGHNMAHDALSVILIVYCFVVIWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYRQGIMKNFLELSFSKIPGSAINFRAWVTDDTEHESAASNLDRGLMNSKQKFNMDVGTKNDKDGQKRLSSILQDLDYNGVDNLKKAKEENAPFNIFVPAEQESKYARWNSKVGVDAEHDKPTDQ 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0986 920 SMART preset_2 253 348 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco02g0986 920 ProSiteProfiles DHHC domain profile. 667 717 - -
Acco02g0986 920 SUPERFAMILY PUA domain-like 96 179 IPR015947 -
Acco02g0986 920 Pfam DHHC palmitoyltransferase 666 787 IPR001594 GO:0016409
Acco02g0986 920 ProSiteProfiles YDG domain profile. 54 209 IPR003105 -
Acco02g0986 920 MobiDBLite consensus disorder prediction 1 21 - -
Acco02g0986 920 SUPERFAMILY SET domain 240 450 IPR046341 -
Acco02g0986 920 Pfam SET domain 391 450 IPR001214 GO:0005515
Acco02g0986 920 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 568 826 - -
Acco02g0986 920 Gene3D - 116 180 IPR036987 -
Acco02g0986 920 Gene3D SET domain 350 452 IPR046341 -
Acco02g0986 920 SMART G9a_1 107 194 IPR003105 -
Acco02g0986 920 Pfam Pre-SET motif 257 345 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco02g0986 920 Gene3D SET domain 232 349 IPR046341 -
Acco02g0986 920 MobiDBLite consensus disorder prediction 1 30 - -
Acco02g0986 920 Pfam SAD/SRA domain 124 179 IPR003105 -
Acco02g0986 920 ProSiteProfiles SET domain profile. 83 456 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0986 Acco-ChrAcco02 6920205 6926573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0986 48 450 Su(var)3-9 homologs AT5G04940 34.921 3.67e-75 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco02g0986 DHHC 2.3e-35 No_clan