LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco02g0973	ATGGGATCTCAAGGAGAAGCAACAATCCAAGAGCCAAAAACACAATCTTTGGCATACCAAGGATCCTCCTTGTACAACCTAACTCTTGATGAAGTACAGAACCAGCTTGGAAATTTAGGGAAGCAACTTGGAAGCATGAATCTTGATGAACTGCTAAAGAGTGTGGGAACTGCAGAAACTACTGGTCAACTAGCTTCTGGGGCGTCGTCTCTGAATCGACAAAACAGCATGACATTATTATCTGGGGATGTTGGAAAGAAAACTGTTGATGAAGTTTGGAGAGATATACAACAACACAAGAAGAGCAATAATAATAAGCAAGATGGGAAATCTAAGGAGAGACAGCCAACTCTAGGAGAGATGACTCTTGAGGATTTTCTTGTGAAGGCAGGAGCAATTTTTGATTCAAATGTTGCTTCTTCTGATCAACACAATATTTCACAACAAGCTCATTGGATCCAATACCAGCTCTCTTCTTCACTGCAACAGCATCATAATCAAAATCATCATGATGTGATGGCAGGTTTAATGACTGGCCATGGAGTTCCACAGCAGCAGCCTAATTTGCCAGTAGCAGTAGTAGCGAACCCGGTTTTGAATTCATCCTACTCTGAAAATATGGTGGCAACAACAATGTCACCATCTTCTTTGATGGGTAAGTTAACAGATTCAAATAGTCCAGGAAGGAAGAGGGAGGCTTCTGGTAGTGACGTGGTTGAGAAAACCATGGAGAGAAGGAAAAAGAGGATGATAAAAAATAGGGAATCTGCAGCTCGGTCAAGAGCAAGAAAGCAGGCTTACACGCAAGAGCTGGAGATTAAAATCTCAAGTTTAGAAGAGGAGAATGAAGAGCTTAGAAGGCAGTATGAAATGGAGAGAGTGTTGCCATATGTTCCACCAACTGAAGCTAAGCATCAACTTCGCAGAACAATCACCTAAATTGCTTTGGTGTATGTACGTTTTGTTATTCTTGTGTCTCCTACTGCCCTTACTTTGATCATCTGA	1005	0.4149	MGSQGEATIQEPKTQSLAYQGSSLYNLTLDEVQNQLGNLGKQLGSMNLDELLKSVGTAETTGQLASGASSLNRQNSMTLLSGDVGKKTVDEVWRDIQQHKKSNNNKQDGKSKERQPTLGEMTLEDFLVKAGAIFDSNVASSDQHNISQQAHWIQYQLSSSLQQHHNQNHHDVMAGLMTGHGVPQQQPNLPVAVVANPVLNSSYSENMVATTMSPSSLMGKLTDSNSPGRKREASGSDVVEKTMERRKKRMIKNRESAARSRARKQAYTQELEIKISSLEEENEELRRQYEMERVLPYVPPTEAKHQLRRTITXIALVYVRFVILVSPTALTLII	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco02g0973	334	Coils	Coil	261	295	-	-
	Acco02g0973	334	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	248	263	IPR004827	GO:0003700\|GO:0006355
	Acco02g0973	334	Gene3D	-	243	295	-	-
	Acco02g0973	334	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	19	312	IPR043452	GO:0003700\|GO:0045893
	Acco02g0973	334	SMART	brlzneu	241	320	IPR004827	GO:0003700\|GO:0006355
	Acco02g0973	334	Pfam	bZIP transcription factor	245	288	IPR004827	GO:0003700\|GO:0006355
	Acco02g0973	334	MobiDBLite	consensus disorder prediction	215	246	-	-
	Acco02g0973	334	MobiDBLite	consensus disorder prediction	95	118	-	-
	Acco02g0973	334	MobiDBLite	consensus disorder prediction	215	231	-	-
	Acco02g0973	334	SUPERFAMILY	Leucine zipper domain	245	291	IPR046347	GO:0003700\|GO:0006355
	Acco02g0973	334	CDD	bZIP_plant_BZIP46	245	291	-	-
	Acco02g0973	334	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	243	290	IPR004827	GO:0003700\|GO:0006355
	Acco02g0973	334	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	243	295	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco02g0973	Acco-ChrAcco02	6829665	6831537	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco02g0973	9	310	bZIP Transcription Factor Family	AT3G56850	50.769	2.58e-85	258

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Acco02g0973		bZIP_1	3.6e-12	CL0018