Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0935 ATGACTTCCCAGCGTTTCAAATATGGTGGCGACGGTTTCCTCGGGGCTATAAATAACTTTTTTGGGGCCATGGTTCATCCTAGTGAGATCGAGCGCAACAAATCTGAGATTGGATTTCAGATTCTAAGCCCTTCCTTCATGGAGACCCGAGCAACCGATCAGAGTGTCGGTAAAGTCGACACAAACGGCCTGTCCTTGAAACTGGGTGAAGAAGTAGCAGAAGCCAAGAGGCCTGATGCCGGCAAAAGTGGCCACCATAAGCTCTGTGCCAGAGGCCACTGGAGGCCCGGAGAGGATGCCAGGCTCAAAGAGCTGGTGGCTCAGTATGGTCCTCAAAACTGGAACCTGATCGCCGAGCATCTCCAAGGACGATCAGGCAAGAGTTGCAGATTGAGGTGGTTTAATCAGCTGGATCCGAGGATTAACAGAATGGCTTTCTCGGAGGAAGAAGAGGAGAGGCTGCTGGCCGCTCATAAGGCGTACGGTAACAAGTGGGCTTTAATCGCTAGACTGTTCCCAGGGAGGACCGACAATGCAGTGAAGAACCACTGGCACGTGATCATGGCGAGGAGGCAGAGAGAGCAGTCTCACGTCTTCAGGAGGAGGAAACCCACTTCTGACAACAACAACATTATTGCAAAGGGATTAAAACTCAGTCCGAGCAACAATGCAGGCAGTGAATCCAGCATGTCAAGCACTAGAGACGAGTCTGCTTCAACCTGCACCAATCTCTCCCTCACTCCCTCCTCCGCTAAACCCTCTCCCTTCCAAAGCCATGGAACACTTATCGGAGGATCGGGGGATGCGGGTTTGGACAAGTTTTTGAGGCAATCAAATAATAGTTCAGACTCAAAGTCGGAAGTATCAGGGAGCGAGTCAGTGGGCCCCTGCAACAACAACAACAGCAAGCGTTTGTCATATACTGGGGAAAGTGAAAACGTGGGGGATAGGATGAAGAAGATGGGTTTCATTGATTTTCTGGGGGTGGGAGCTGCGGCATAG 1002 0.512 MTSQRFKYGGDGFLGAINNFFGAMVHPSEIERNKSEIGFQILSPSFMETRATDQSVGKVDTNGLSLKLGEEVAEAKRPDAGKSGHHKLCARGHWRPGEDARLKELVAQYGPQNWNLIAEHLQGRSGKSCRLRWFNQLDPRINRMAFSEEEEERLLAAHKAYGNKWALIARLFPGRTDNAVKNHWHVIMARRQREQSHVFRRRKPTSDNNNIIAKGLKLSPSNNAGSESSMSSTRDESASTCTNLSLTPSSAKPSPFQSHGTLIGGSGDAGLDKFLRQSNNSSDSKSEVSGSESVGPCNNNNSKRLSYTGESENVGDRMKKMGFIDFLGVGAAA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0935 333 CDD SANT 154 185 IPR001005 -
Acco02g0935 333 SMART sant 142 190 IPR001005 -
Acco02g0935 333 SMART sant 90 139 IPR001005 -
Acco02g0935 333 Gene3D - 91 142 - -
Acco02g0935 333 MobiDBLite consensus disorder prediction 273 309 - -
Acco02g0935 333 Pfam Myb-like DNA-binding domain 143 186 IPR001005 -
Acco02g0935 333 Pfam Myb-like DNA-binding domain 91 137 IPR001005 -
Acco02g0935 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 192 IPR017930 -
Acco02g0935 333 PANTHER MYB PROTEIN-RELATED 91 244 - -
Acco02g0935 333 FunFam MYB transcription factor 91 142 - -
Acco02g0935 333 MobiDBLite consensus disorder prediction 205 261 - -
Acco02g0935 333 SUPERFAMILY Homeodomain-like 91 184 IPR009057 -
Acco02g0935 333 MobiDBLite consensus disorder prediction 192 314 - -
Acco02g0935 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 137 IPR017930 -
Acco02g0935 333 Gene3D - 145 206 - -
Acco02g0935 333 ProSiteProfiles Myb-like domain profile. 138 188 IPR001005 -
Acco02g0935 333 CDD SANT 94 135 IPR001005 -
Acco02g0935 333 ProSiteProfiles Myb-like domain profile. 91 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0935 Acco-ChrAcco02 6551496 6552792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0935 81 332 MYB Transcription Factor Family AT5G17800 49.805 1.70e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0935 Myb_DNA-binding 1.6e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0935 02 6551496 6552792 Acco02g0935 02 6551496 6552792 ECH