Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0934 ATGGAAGATCAAGGTGAGGGGCAAAAACAAGAGAGCAATAATGGTCCGAACCAAGGCTCGGAGAGGAGCGAGCCGGTGAGGTCACGGTGGACTCCAAAACCTGAACAAATCCTCATCCTTGAGTCCATCTTCAACAGTGGAATGGTCAATCCCCCAAAGGAGGAAACCATCCGCATCCGAAAGCTCCTCGAGAAGTTCGGCCCCGTAGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTTGAGCAGCGAAACCACCAGCTTCATCAGCCAGCACAGCAGCTTCATGGCGGTGCAACAATTACTTATGATCATCACCATCATCAACAACCTCATGCCACCTCATCTTCTGATCCACTATTCCCTCCGGTTTCTACCGTGCCTTTTGCCGCTGCTTCTCCGTCGTCGTCTTTCCTTGATCTCTCCGGTTCGGCTTCTTCTTCTTCTTGTGGCATGCTTGGCGGCCAAGAAGCCCTTGACGGTCTTTTCTCATCGGTAGCTTCTCAAATGTGCTTCCCTGAATTTGATCACTACTCTTCGGCTGCTTCTTCAGCTCTATATCCTCCTCCCTCTCATGCTTCCTCCTTCAACTATCATTCTGGACTGATCACAGTGTTTATCAATGGAGTGGCAACTGAAGTTCCAAGGGGAGCATTGGACATAAAAACAATGTTTGGGCAAGATCTGGTGTTAGTTCATTCCTCCGGAGTGCCACTTCCCACCAATGAGTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGAGAAAGCTACTTTCTGGTGATTAGAGCACCTCCTAATTATTTATATAATTCATTGATTTCCCATATTTATTTGTCTCAAAGCCAACATAATAAAAAGCAACTAGCAGCAATGGGAGCTTCCTTTTATGTTTCTCCAAATTAA 948 0.4884 MEDQGEGQKQESNNGPNQGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGPVGDANVFYWFQNRRSRSRRRQRQMQASLEQRNHQLHQPAQQLHGGATITYDHHHHQQPHATSSSDPLFPPVSTVPFAAASPSSSFLDLSGSASSSSCGMLGGQEALDGLFSSVASQMCFPEFDHYSSAASSALYPPPSHASSFNYHSGLITVFINGVATEVPRGALDIKTMFGQDLVLVHSSGVPLPTNEFGFLMQSLQHGESYFLVIRAPPNYLYNSLISHIYLSQSQHNKKQLAAMGASFYVSPN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0934 315 Gene3D - 25 95 - -
Acco02g0934 315 MobiDBLite consensus disorder prediction 8 25 - -
Acco02g0934 315 SMART HOX_1 25 92 IPR001356 GO:0003677
Acco02g0934 315 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Acco02g0934 315 PANTHER WUSCHEL-RELATED HOMEOBOX 11 8 277 IPR044558 GO:0003700|GO:0048830
Acco02g0934 315 MobiDBLite consensus disorder prediction 1 32 - -
Acco02g0934 315 SUPERFAMILY Homeodomain-like 21 94 IPR009057 -
Acco02g0934 315 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Acco02g0934 315 MobiDBLite consensus disorder prediction 86 106 - -
Acco02g0934 315 FunFam WUSCHEL-related homeobox 11 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0934 Acco-ChrAcco02 6537889 6539729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0934 19 291 Wox Gene Family AT3G03660 51.264 2.40e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco02g0934 Homeodomain 1.1e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0934 02 6537889 6539729 Acco02g0934 02 6537889 6539729 ECH