Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0906 ATGATGTTGGACTTGGAACCTGTTTCAAAATCCTGTAAGTCCCATGAAGAAGAGGAAGGTGACAAAAGACCTCTACTCCTTCAATGCGCAGAACTCATCCTCCCATGGCTAACCTCTTTGGAGTTCGCCAACGTCTCTTTGACCTGCAAAGCCTTTTCCCTAATTTCCAAAACCGTCATTCTCTGCCGCGTATCTGATTCTTCAAGAGGATTCGAGAACTGGCCTATCCCATTCTGCAACACCGTTGATGATACGCCATACGCTTCCTTCACCTACACTCCTTCCCTAATTCTACCTTCTGATTCACAATATTTCCGTCAATCATGGGGTTCGAATTTTGCTGCCACCCGTGACGGGGTTGGTAAGCTTGCTATGGAACCGGTGAGTTTAGTTGATGAAGAGGGTCAGAGCGTATCAGGATGTGACTGTCGCACTTGTGGGGATGTAGGGGATGAAGATAACAGGTGTCCTTGTTCGAACTTGGCTGGGTTGGATGTGGCTAACGAGTGCGGACTGAGTTGTAAGTGCGGGTTGCAGTGTGGGAATCGTTTGAGTCAGAAGGGGATCTCTGTTCGATTGAAAATCGTCAGGGATAGGAGGAAGGGATGGGGTTTGTACTCTGACCAATTGATACCAAAAGGGCAGTTCGTATGTGAATATGCAGGCGAGCTCTTGACAACCAAGGAAGCGAGGAGGAGACATCTGTGTTATGATGAGCTTTCATCGCAAGGTAAGTTTTCTTCTGCTCTTTTGGTTGTGAAGGAGCATCTGCCATCTGGAAGGGCTTGTTTGAGGATGAACATTGATGCGACGAGAATAGGAAATGTTGCTCGGTTCATTAATCATTCTTGTGATGGTGGTAATTTAACCACGAAATTAGTGAGAAGGTCGGGAGCTTTATTTCCTCGACTTTGTTTCTTTGCTTTAGAAGATATAGAAAGGGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGACAAGGCCTATGGGCTTGCCATGTTTTTGTGGTAGCTCTTCTTGCTTTGGAACATTGCCTTCAGAAGACACTTAA 1053 0.4577 MMLDLEPVSKSCKSHEEEEGDKRPLLLQCAELILPWLTSLEFANVSLTCKAFSLISKTVILCRVSDSSRGFENWPIPFCNTVDDTPYASFTYTPSLILPSDSQYFRQSWGSNFAATRDGVGKLAMEPVSLVDEEGQSVSGCDCRTCGDVGDEDNRCPCSNLAGLDVANECGLSCKCGLQCGNRLSQKGISVRLKIVRDRRKGWGLYSDQLIPKGQFVCEYAGELLTTKEARRRHLCYDELSSQGKFSSALLVVKEHLPSGRACLRMNIDATRIGNVARFINHSCDGGNLTTKLVRRSGALFPRLCFFALEDIERDEELTFSYGEIRTRPMGLPCFCGSSSCFGTLPSEDT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0906 350 SMART set_7 191 329 IPR001214 GO:0005515
Acco02g0906 350 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 49 340 - -
Acco02g0906 350 Gene3D SET domain 47 328 IPR046341 -
Acco02g0906 350 ProSiteProfiles Post-SET domain profile. 330 346 IPR003616 -
Acco02g0906 350 ProSiteProfiles SET domain profile. 191 323 IPR001214 GO:0005515
Acco02g0906 350 Pfam SET domain 202 323 IPR001214 GO:0005515
Acco02g0906 350 SUPERFAMILY SET domain 73 343 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0906 Acco-ChrAcco02 6357512 6359009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0906 42 345 C2H2 Transcription Factor Family AT2G23740 28.660 1.67e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco02g0906 SET 2.3e-18 No_clan