Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0892 ATGGACAGGCTCATAAGATTAGACCCATCAAACATTGTTCCCATCAGAGTTGAAGCAGGGCAAAAATGTGTTGGCCATATCACATTACGCAATGTGATGTACACCATGCCCGTGGCCTTTAGGCTTCAACCTCTGATCAAAACTCGTTACACAGTGAAACCTCAGTCTGGAATTATATCTCCTTTGGCCGCACTTACACTGGAGATCGTCTATCATCTTCCACCAGGAGCTACTCTTCCCCACTCTTATCCTCATTCCAATGATTCTTTCCTTCTTCACAGTGTGGTGGTTCCTGGTGCAGCAATTAAAGAGTCTTCCTCTATGTGTGACTCTGTTCCAAGCGACTGGTTCACCACTAAGAAGAAACAGGTGTTCATAGACAGTGGCATCAAGATCATGTTTGTTGGTTCGCCAATTCTGGCTCAACTCGTTGCAGATGGTTCCATGGATGATATCAGGGAGGCCCTGGAACGAAGCGACCCGTCATGGAAGGCCTCAGACTCAATGGACTCACAAGGCCAGACTTTACTTCACTTGGCTATTTCACAGAGCAGACCTGATCTTGTTCAATTACTTCTCGAATTCAACCCTGATATAGAAACTCCAAATCGAGCTGGTTCAACCCCACTTGAGGCTGCTTCTTCCTCCGGCGAATCCTTAATTGTTGAGCTTCTATTAGCTCACAAGGCCAACACTGAACGATCAGAATCATCCAGTTGGGGGCCAATTCACCAAGCAGCTAAAGGAGGACACTTGGAGGTCCTGAGGCTTCTTTTACTGAAAGGGGCTAAAGTTGATTCTCAAGCAAAAGATGGTAGCACAGCTTTGCATCTTGCAGTTGAAGAACGAAGACGAGATTGCGCTAGGCTTCTGTTGGCTAACGGTGCCAGAACCGACGTTCGTAACACCAGAGACGGCGACACACCGTTACACATAGCCGCATCCACCGGCGATGAGAACATGGTAAAGCTATTGCTACAAAAGGGTGCGAATAAGGAGGTGAGAAATGGGTTGGGGAAAACCGCATACGACGTCGCCGCCGAGAATGGATATATGCGTCTCTTCGACGCGCTTAAATTAGGGGACGATCTCTGCGTAGCGGCGAGAAAAGGGGATGTGAGAACGATGCAGAAGCTGATCGAGAACGGAGCATCCATTAATGGGAGAGACCAACACAGCTGGACGGCGCTTCACAGAGCCGCCTTCAAAGGACGAACGGATGCGGTTAGGCTTCTGCTAGAGAAAGGGGTAGATGTGGATGCTAAAGACGAGGATGGGTACACGGCGTTACATTGCGCGGCGGAGTCCGGCCACGCCGACGTGACGGAGCTGTTGGTGAAGAAGGGAGGGGATGTTGAAGCGAGGACCAATAAGGGCGTGACCGCGTTACAAATAGCAGAGTCGCTGCACTATGTGGGGATCACGAGGATCCTCGTCAACGGCGGGGCTAGTAAGGAGAACAACGGTCAGATTCCGGTACCGGCGTCGACTATTCCGTTTGGGAAACAAATGGAGGGTGGGGAGAAGAAGAAGAAGATAATCAGAAACAGAGGGCTTCGAGGAAGCTTCGATCGTGCGGCGGCTCTGGCAGTGATGTAG 1599 0.5022 MDRLIRLDPSNIVPIRVEAGQKCVGHITLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLAALTLEIVYHLPPGATLPHSYPHSNDSFLLHSVVVPGAAIKESSSMCDSVPSDWFTTKKKQVFIDSGIKIMFVGSPILAQLVADGSMDDIREALERSDPSWKASDSMDSQGQTLLHLAISQSRPDLVQLLLEFNPDIETPNRAGSTPLEAASSSGESLIVELLLAHKANTERSESSSWGPIHQAAKGGHLEVLRLLLLKGAKVDSQAKDGSTALHLAVEERRRDCARLLLANGARTDVRNTRDGDTPLHIAASTGDENMVKLLLQKGANKEVRNGLGKTAYDVAAENGYMRLFDALKLGDDLCVAARKGDVRTMQKLIENGASINGRDQHSWTALHRAAFKGRTDAVRLLLEKGVDVDAKDEDGYTALHCAAESGHADVTELLVKKGGDVEARTNKGVTALQIAESLHYVGITRILVNGGASKENNGQIPVPASTIPFGKQMEGGEKKKKIIRNRGLRGSFDRAAALAVM 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 238 266 - -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 238 270 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Acco02g0892 532 Pfam Ankyrin repeats (3 copies) 159 232 IPR002110 GO:0005515
Acco02g0892 532 Pfam Ankyrin repeats (3 copies) 243 336 IPR002110 GO:0005515
Acco02g0892 532 SUPERFAMILY PapD-like 2 150 IPR008962 -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 172 204 - -
Acco02g0892 532 PANTHER ANKYRIN REPEAT CONTAINING 241 350 - -
Acco02g0892 532 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Acco02g0892 532 PRINTS Ankyrin repeat signature 408 422 IPR002110 GO:0005515
Acco02g0892 532 Gene3D - 360 429 IPR036770 -
Acco02g0892 532 Pfam Ankyrin repeats (many copies) 394 446 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Acco02g0892 532 Gene3D - 304 359 IPR036770 -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Acco02g0892 532 Gene3D - 430 480 IPR036770 -
Acco02g0892 532 Gene3D Immunoglobulins 1 128 IPR013783 -
Acco02g0892 532 SMART ANK_2a 238 267 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 205 234 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 172 201 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 458 487 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 271 300 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 392 421 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 425 454 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 305 334 IPR002110 GO:0005515
Acco02g0892 532 SMART ANK_2a 359 388 IPR002110 GO:0005515
Acco02g0892 532 Gene3D - 135 303 IPR036770 -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 205 231 - -
Acco02g0892 532 SUPERFAMILY Ankyrin repeat 168 489 IPR036770 -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Acco02g0892 532 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0892 345 483 Ion Channels AT4G32500 30.000 5.63e-09 57.0