Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0865 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGACTTGGTGATCTTCAGCCTGCCCCACTGCCTGTTGATCAAGGAGGGAATTGTGCACAACCTGCTCCAACTAGAGCCAGGAGAAGAGTTGGAGGTGGAAGAGGACGTGGTAATGCCACAGCTGTAGCAAAAGGACCTTCACCAGCAGTACCCACAAGGAGAACTGCAGCTGGACGAGGTCGGGGAGTAAGATTAATTAATCTTGACCCTGAACCTTGTGAGGTCCTTCCTGATCCAGTTGCTCTGGGAGCTCCAGAACCCCTACGTGTTGAGGCGTTGGGCAACAATAAAATTGTGATGGAAGGTGGAAGTGCAGACAAGGTGGTTGGAGCTGAAGAGGAAGCTACCACGACCCCTATTCCTGAGAAGGTTCAAGTTGGTACTTCTCCTATGTATAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTTGGCCAAGTGTATGTTGGCAGAAGGGTAGGTGGTGGCTCTGATCGGACAGGTCCTGATGCGATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGCAATTATGGACCTCCTTATGAGTGGCAGGTCTACAATACTTTGAATGGGTGTTATGGCATTCCCTGGGTTCATTACAAGGGCCGACAAGGAGATTTCTATATTCTGGTCATGGACATGCTTGGACCCAGTCTTTGGGATGTATGGAATTCACTCGGACAATCGATGTCCCCAAATATGGTTGCCTGCATTGCAGTGGAAGCAATATCAATTCTTGAGAGGCTCCACATGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTCTTACTTGGTCAACCTGGAACAGCTGATGAGAAAAAGCTATATCTCATTGATCTTGGGTTGGCTTCAAGATGGAAGGATGCATCATCTGGTCAGCATGTTGACTATGACCAGAGACCCGATATTTTTAGGGGAACAATAAGGTATGCTAGTGTGCATGCTCATTTAGGTAGGACAGGAAGTCGAAGGGACGATCTTGAATCACTGGCCTACACTCTAATATTTCTCATAAAAGGGAGGTTACCGTGGCAGGGGTATCAGGGTGACAATAAAAGTTTTCTTGTCTGTAAGAAGAAGATGTCCACTTCTCCAGAGTTGATGTGTTGCTTTTGTCCTGCCCCATTCAAACAATTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAATTATTCCAAGCTTATATCTTTTTTCGATAGCTTGATTGAACCATGTGTACCATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGCGTGGGAGGATGCTTGTTCCCCTGGAAGATGATGAGCAGCCAAAGAAGAAAGTACGCATGGGGAGTCCTGCTACACAGTGGATTTCAGTTTATAATGCACGCCGTCCCATGAAGCAGAGGTATCATTACAATGTTGCAGACACAAGGCTTCGTCAGCATGTAGATAAGGGTAATGAAGATGGGTTGTATATCAGCTCTGTGGCCTCCTCATCAAATCTATGGGCCCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTGTACGAATTGTCACCTGTCTTCCTGCATAAGGACTGGATTATGGAACAGTGGGAGAAAAATTTTTATATCAGTTCAATAGCTGGTGCAACTAATGGGAGTTCCTTGGTCGTCATGTCCAAAGGAACTACTTACACACAGCAATCCTACAAAGTGAGTGAATCATTTCCTTTCAAGTGGATTAATAAGAAGTGGAAAGAAGGATTTCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTATATTCAAGTGAAGGAATACATCGGCGATGGGAAAGTGGCTACCGCATAACATCTATGGCTGCTACTGCTGACCAGGCAGCTTTTATACTCAGCATACCGAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGTACCTCTGCCTTCCCTAGTACCCATGTAAAGGAAAAATGGTCCAAGAATCTCTATATTGCATCAATTTGTTACGGGCGGACTGTATGCTAG 2118 0.4518 MPELRSGARRSKRLGDLQPAPLPVDQGGNCAQPAPTRARRRVGGGRGRGNATAVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEVLPDPVALGAPEPLRVEALGNNKIVMEGGSADKVVGAEEEATTTPIPEKVQVGTSPMYKIERKLGKGGFGQVYVGRRVGGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILERLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFDSLIEPCVPLRPIRIDGALKVGQKRGRMLVPLEDDEQPKKKVRMGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISSVASSSNLWALIMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNFYISSIAGATNGSSLVVMSKGTTYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYSSEGIHRRWESGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0865 705 PANTHER CASEIN KINASE-RELATED 136 669 - -
Acco02g0865 705 CDD STKc_CK1 143 418 - -
Acco02g0865 705 ProSiteProfiles Protein kinase domain profile. 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0865 705 Pfam Protein kinase domain 144 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0865 705 ProSitePatterns Protein kinases ATP-binding region signature. 150 181 IPR017441 GO:0005524
Acco02g0865 705 Gene3D Transferase(Phosphotransferase) domain 1 115 442 - -
Acco02g0865 705 SMART serkin_6 144 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0865 705 SUPERFAMILY Protein kinase-like (PK-like) 144 425 IPR011009 -
Acco02g0865 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Acco02g0865 705 MobiDBLite consensus disorder prediction 1 67 - -
Acco02g0865 705 FunFam Casein kinase 1-like protein 116 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0865 Acco-ChrAcco02 6090306 6095904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0865 261 418 MAP Kinase Kinase Kinase AT5G50180 23.750 3.00e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Acco02g0865 Pkinase 8.1e-16 CL0016