Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0852 ATGGAGGGTGATGGGCGATTGTGCAACACTTGCTCTAACATGGTGAATCCAATGAGGGAAGGAGAGAACAAATGCCCTGTTTGTGGGTCAGGATTTACAGAGGCAATAATGGAGAACGAAGAAGGCAACGATTTGTTCAGATCAGCCTCTGTGTTCTCTCTTTACGCGCCAATACTACTGGGTTTGATGAATGCTCTCACACCTGCTCTAGCAACCATCATCAGCAGCAACAACAACAACAATGGTTCGAGTTCAAGGCAGGAGGAAAACGACGAGCAAGAGATAACGGAACAGCGTGGTGACCTTATGGTGAGAAGAAGAACATCGTCCACTTCCCTCATGCTCATCTTTCGTCGTCTCCACACGGAATCTGATCGAAATGCTAATAACACGGAAAACAATCACGGAAACAATAACGGTGGTGGTTATATAAATAATAGTAACGTGAATCTCAACGAGGTTGTGATTGATCCGCTTTACGAAGAGGCTTTGATTCTGAGAGGTCCTTTGCAGATGAACAACGCTGGAAGTAATAATTCTCCGATGGGGTGGTCTCTTGGCGACTTTTTGGATGGGCCTGGGTTTGGGTTATTACTGCAACATTTGGCACAGAGTAGTAATAATGAGGTTAATAGATACGTGAATAGCGTGAACCCGCCGGCGAAGAAGGCGGCGATAGAGGCGATGCCGACGGTGATCGCGGAGGAGAATAAGCAGTGTGTAATATGTTTGGAGGAAGCAGAGATTGGGAGTGAAGTGAAGGAGATGCCATGTGGGCATAAGTTTCACGGTGACTGCATTGTCTCGTGGCTGAAACTTCGGAGTTCTTGCCCTGTTTGTAGGTTTCAGATGCCGTCCGATGATTCCAAGGTTGAAGCTAACGGTGGACGTCGGAATGAAGGTGGTCCGAGTAACGATCAAGCGATGGATAGAGAACGGAGAATGAGTTTTGGAAGATGGAATTGGCTTTCCATATTGCAGCCACTTGACTACTTTCTTCCTTCTCCTTGA 1011 0.4679 MEGDGRLCNTCSNMVNPMREGENKCPVCGSGFTEAIMENEEGNDLFRSASVFSLYAPILLGLMNALTPALATIISSNNNNNGSSSRQEENDEQEITEQRGDLMVRRRTSSTSLMLIFRRLHTESDRNANNTENNHGNNNGGGYINNSNVNLNEVVIDPLYEEALILRGPLQMNNAGSNNSPMGWSLGDFLDGPGFGLLLQHLAQSSNNEVNRYVNSVNPPAKKAAIEAMPTVIAEENKQCVICLEEAEIGSEVKEMPCGHKFHGDCIVSWLKLRSSCPVCRFQMPSDDSKVEANGGRRNEGGPSNDQAMDRERRMSFGRWNWLSILQPLDYFLPSP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0852 336 MobiDBLite consensus disorder prediction 87 103 - -
Acco02g0852 336 CDD RING-H2_PA-TM-RING 239 281 - -
Acco02g0852 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 82 285 - -
Acco02g0852 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 287 IPR013083 -
Acco02g0852 336 ProSiteProfiles Zinc finger RING-type profile. 240 281 IPR001841 -
Acco02g0852 336 SUPERFAMILY RING/U-box 228 287 - -
Acco02g0852 336 Pfam Ring finger domain 239 281 IPR001841 -
Acco02g0852 336 MobiDBLite consensus disorder prediction 78 103 - -
Acco02g0852 336 FunFam E3 ubiquitin-protein ligase RNF181 209 287 - -
Acco02g0852 336 SMART ring_2 240 280 IPR001841 -
Acco02g0852 336 MobiDBLite consensus disorder prediction 288 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0852 Acco-ChrAcco02 6022890 6023900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0852 219 301 C3H Transcription Factor Family AT1G26800 53.571 1.03e-23 95.1